RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 OR10J3Q5JRS4 329 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 Q6ZTC4 211 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 STAB2Q8WWQ8 2551 aa17.1■□□□□ 0.33
LRFN4-202ENST00000393952 C18orf32Q8TCD1 76 aa17.1■□□□□ 0.33
LRFN4-202ENST00000393952 LAMTOR2Q9Y2Q5 125 aa17.1■□□□□ 0.33
LRFN4-202ENST00000393952 TMA7Q9Y2S6 64 aaKnown RBP17.1■□□□□ 0.33
LRFN4-202ENST00000393952 K7EQD1 137 aa17.09■□□□□ 0.33
LRFN4-202ENST00000393952 FBN3Q75N90 2809 aa17.09■□□□□ 0.33
LRFN4-202ENST00000393952 NIT2Q9NQR4 276 aa17.08■□□□□ 0.32
LRFN4-202ENST00000393952 HHLA3Q9XRX5 114 aa17.08■□□□□ 0.32
LRFN4-202ENST00000393952 TRBV6-4A0A1B0GX49 114 aa17.07■□□□□ 0.32
LRFN4-202ENST00000393952 F5H768 121 aa17.07■□□□□ 0.32
LRFN4-202ENST00000393952 PPP1R17O96001 155 aa17.07■□□□□ 0.32
LRFN4-202ENST00000393952 NEXN-AS1Q8NBZ9 246 aa17.06■□□□□ 0.32
LRFN4-202ENST00000393952 LOC389332A0A1B0GUA5 103 aa17.06■□□□□ 0.32
LRFN4-202ENST00000393952 CRYBA4P53673 196 aa17.06■□□□□ 0.32
LRFN4-202ENST00000393952 MAP1LC3AQ9H492 121 aa17.06■□□□□ 0.32
LRFN4-202ENST00000393952 PRO0255Q9UI72 69 aa17.06■□□□□ 0.32
LRFN4-202ENST00000393952 TRBV6-5A0A0K0K1A5 114 aa17.05■□□□□ 0.32
LRFN4-202ENST00000393952 LOC100131303A0A0U1RQF7 123 aa17.05■□□□□ 0.32
LRFN4-202ENST00000393952 RHOHQ15669 191 aa17.05■□□□□ 0.32
LRFN4-202ENST00000393952 ST20Q9HBF5 79 aa17.05■□□□□ 0.32
LRFN4-202ENST00000393952 SUMO2P61956 95 aaKnown RBP17.04■□□□□ 0.32
LRFN4-202ENST00000393952 Q0VG73 95 aa17.04■□□□□ 0.32
LRFN4-202ENST00000393952 TRBV10-1A0A0K0K1A3 114 aa17.03■□□□□ 0.32
LRFN4-202ENST00000393952 C20orf78Q9BR46 151 aa17.03■□□□□ 0.32
LRFN4-202ENST00000393952 PRADC1Q9BSG0 188 aa17.03■□□□□ 0.32
LRFN4-202ENST00000393952 TNFRSF18Q9Y5U5 241 aa17.03■□□□□ 0.32
LRFN4-202ENST00000393952 A0A0J9YY99 117 aa17.02■□□□□ 0.32
LRFN4-202ENST00000393952 NDUFA6P56556 154 aa17.02■□□□□ 0.32
LRFN4-202ENST00000393952 BAGE3Q86Y29 109 aa17.02■□□□□ 0.32
LRFN4-202ENST00000393952 DNAJC30Q96LL9 226 aa17.02■□□□□ 0.32
LRFN4-202ENST00000393952 PAX4O43316 350 aa17.02■□□□□ 0.31
LRFN4-202ENST00000393952 IFI27P40305 119 aaPredicted RBP17.02■□□□□ 0.31
LRFN4-202ENST00000393952 ZNRF2Q8NHG8 242 aa17.02■□□□□ 0.31
LRFN4-202ENST00000393952 VSIG2Q96IQ7 327 aa17.02■□□□□ 0.31
LRFN4-202ENST00000393952 TRAV26-1A0A087WT03 109 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 GAGE12JA6NER3 117 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 SDHAF1A6NFY7 115 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 PRSS47A8MTI9 375 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 GAGE1Q13065 139 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 GAGE4Q13068 117 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 GAGE5Q13069 117 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 GAGE13Q4V321 117 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 NEGR1Q7Z3B1 354 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 TMEM70Q9BUB7 260 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 SMIM2Q9BVW6 85 aa17.01■□□□□ 0.31
LRFN4-202ENST00000393952 DEFB131BA0A096LNP1 70 aa17■□□□□ 0.31
LRFN4-202ENST00000393952 POLR2KP53803 58 aaKnown RBP17■□□□□ 0.31
LRFN4-202ENST00000393952 RPL36AP83881 106 aaKnown RBP17■□□□□ 0.31
LRFN4-202ENST00000393952 PRSS3P2Q8NHM4 247 aa17■□□□□ 0.31
LRFN4-202ENST00000393952 RPL36ALQ969Q0 106 aaKnown RBP17■□□□□ 0.31
LRFN4-202ENST00000393952 URB1-AS1Q96HZ7 61 aa17■□□□□ 0.31
LRFN4-202ENST00000393952 TRBV7-3A0A075B6L6 115 aa16.99■□□□□ 0.31
LRFN4-202ENST00000393952 GYPEP15421 78 aa16.99■□□□□ 0.31
LRFN4-202ENST00000393952 IGLV2-18A0A075B6J9 118 aa16.98■□□□□ 0.31
LRFN4-202ENST00000393952 NIT1Q86X76 327 aa16.98■□□□□ 0.31
LRFN4-202ENST00000393952 Q8N8P6 123 aa16.98■□□□□ 0.31
LRFN4-202ENST00000393952 PMCHP20382 165 aa16.98■□□□□ 0.31
LRFN4-202ENST00000393952 LINC00310P59036 64 aa16.98■□□□□ 0.31
LRFN4-202ENST00000393952 RPL32P62910 135 aaKnown RBP16.98■□□□□ 0.31
LRFN4-202ENST00000393952 TRAV10A0A0B4J240 114 aa16.97■□□□□ 0.31
LRFN4-202ENST00000393952 SERF1AO75920 110 aa16.97■□□□□ 0.31
LRFN4-202ENST00000393952 RNASEKQ6P5S7 137 aaKnown RBP16.97■□□□□ 0.31
LRFN4-202ENST00000393952 DEFB104AQ8WTQ1 72 aa16.97■□□□□ 0.31
LRFN4-202ENST00000393952 NXT2Q9NPJ8 142 aaKnown RBP16.97■□□□□ 0.31
LRFN4-202ENST00000393952 VCYO14598 125 aa16.96■□□□□ 0.31
LRFN4-202ENST00000393952 UBE2D3P61077 147 aa16.96■□□□□ 0.31
LRFN4-202ENST00000393952 UBE2D2P62837 147 aa16.96■□□□□ 0.31
LRFN4-202ENST00000393952 COA6Q5JTJ3 125 aaKnown RBP16.96■□□□□ 0.31
LRFN4-202ENST00000393952 FA2HQ7L5A8 372 aa16.96■□□□□ 0.31
LRFN4-202ENST00000393952 PHLDA1Q8WV24 401 aaPredicted RBP16.96■□□□□ 0.31
LRFN4-202ENST00000393952 IGHV3-38A0A0C4DH36 116 aa16.95■□□□□ 0.3
LRFN4-202ENST00000393952 TRBV27A0A0K0K1C4 114 aa16.95■□□□□ 0.3
LRFN4-202ENST00000393952 NUPR1O60356 82 aa16.95■□□□□ 0.3
LRFN4-202ENST00000393952 S100A6P06703 90 aa16.95■□□□□ 0.3
LRFN4-202ENST00000393952 LINC00694P0DN24 101 aa16.95■□□□□ 0.3
LRFN4-202ENST00000393952 LINC00614P0C842 121 aa16.94■□□□□ 0.3
LRFN4-202ENST00000393952 TCAPO15273 167 aa16.94■□□□□ 0.3
LRFN4-202ENST00000393952 I3L3M4 83 aa16.93■□□□□ 0.3
LRFN4-202ENST00000393952 TSHBP01222 138 aa16.91■□□□□ 0.3
LRFN4-202ENST00000393952 CHCHD1Q96BP2 118 aaKnown RBP16.91■□□□□ 0.3
LRFN4-202ENST00000393952 KIR2DL4Q99706 377 aa16.91■□□□□ 0.3
LRFN4-202ENST00000393952 AP5S1Q9NUS5 200 aa16.91■□□□□ 0.3
LRFN4-202ENST00000393952 LINC01546A6NGU7 62 aa16.9■□□□□ 0.3
LRFN4-202ENST00000393952 DAZ4Q86SG3 579 aaKnown RBP16.9■□□□□ 0.3
LRFN4-202ENST00000393952 DAZ3Q9NR90 486 aaKnown RBP16.9■□□□□ 0.3
LRFN4-202ENST00000393952 ICOSQ9Y6W8 199 aa16.9■□□□□ 0.3
LRFN4-202ENST00000393952 A0A096LPF7 62 aa16.89■□□□□ 0.3
LRFN4-202ENST00000393952 H3BNG1 76 aa16.89■□□□□ 0.3
LRFN4-202ENST00000393952 SNRPEP62304 92 aaKnown RBP16.89■□□□□ 0.3
LRFN4-202ENST00000393952 ATP6V0E2Q8NHE4 81 aa16.89■□□□□ 0.29
LRFN4-202ENST00000393952 FCER1GP30273 86 aa16.88■□□□□ 0.29
LRFN4-202ENST00000393952 MRPL23Q16540 153 aaKnown RBP16.88■□□□□ 0.29
LRFN4-202ENST00000393952 HSBP1O75506 76 aa16.87■□□□□ 0.29
LRFN4-202ENST00000393952 ESDP10768 282 aa16.87■□□□□ 0.29
LRFN4-202ENST00000393952 COTL1Q14019 142 aa16.87■□□□□ 0.29
LRFN4-202ENST00000393952 LAGE3Q14657 143 aa16.87■□□□□ 0.29
LRFN4-202ENST00000393952 PMCHL1Q16048 86 aa16.87■□□□□ 0.29
LRFN4-202ENST00000393952 PDZD11Q5EBL8 140 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms