RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RS1O15537 224 aa15.43■□□□□ 0.06
SPHK1-202ENST00000392496 MRPL16Q9NX20 251 aaKnown RBP15.43■□□□□ 0.06
SPHK1-202ENST00000392496 C18orf15Q96N68 181 aa15.42■□□□□ 0.06
SPHK1-202ENST00000392496 TRBV27A0A0K0K1C4 114 aa15.41■□□□□ 0.06
SPHK1-202ENST00000392496 WIPF1O43516 503 aa15.41■□□□□ 0.06
SPHK1-202ENST00000392496 C16orf74Q96GX8 76 aa15.41■□□□□ 0.06
SPHK1-202ENST00000392496 KIR2DL4Q99706 377 aa15.41■□□□□ 0.06
SPHK1-202ENST00000392496 TENM1Q9UKZ4 2725 aa15.41■□□□□ 0.06
SPHK1-202ENST00000392496 G0S2P27469 103 aa15.4■□□□□ 0.06
SPHK1-202ENST00000392496 TOMM6Q96B49 74 aa15.4■□□□□ 0.06
SPHK1-202ENST00000392496 NACAE9PAV3 2078 aa15.4■□□□□ 0.06
SPHK1-202ENST00000392496 MAJINQ3KP22 176 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 ZFP2Q6ZN57 461 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 NEGR1Q7Z3B1 354 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 IGHV3-73A0A0B4J1V6 119 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 DAZ2Q13117 558 aaKnown RBP15.39■□□□□ 0.05
SPHK1-202ENST00000392496 PMCHL2Q9BQD1 86 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 MIEN1Q9BRT3 115 aa15.39■□□□□ 0.05
SPHK1-202ENST00000392496 IGLL1P15814 213 aa15.38■□□□□ 0.05
SPHK1-202ENST00000392496 RRN3P1Q2M238 152 aa15.38■□□□□ 0.05
SPHK1-202ENST00000392496 TRGV1A0A0A0MS02 117 aa15.37■□□□□ 0.05
SPHK1-202ENST00000392496 LINC01549A6NIU2 74 aa15.37■□□□□ 0.05
SPHK1-202ENST00000392496 HSBP1L1C9JCN9 74 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 PRSS1P07477 247 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 DEFA6Q01524 100 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 C2orf66Q6UXQ4 117 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 PLAC8L1A1L4L8 177 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 IGHV3-53P01767 116 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 IGLC3P0DOY3 106 aa15.36■□□□□ 0.05
SPHK1-202ENST00000392496 STAB1Q9NY15 2570 aa15.35■□□□□ 0.05
SPHK1-202ENST00000392496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.35■□□□□ 0.05
SPHK1-202ENST00000392496 SCGB3A1Q96QR1 104 aa15.35■□□□□ 0.05
SPHK1-202ENST00000392496 hDV102S1A0JD36 115 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 I3L3M4 83 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 OR4C5Q8NGB2 326 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 OVOL2Q9BRP0 275 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 CYSLTR1Q9Y271 337 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 VWFP04275 2813 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 ODF1Q14990 250 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 RHOHQ15669 191 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 Q6ZSN1 163 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 Q6ZTI0 123 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 NOP10Q9NPE3 64 aaKnown RBP15.34■□□□□ 0.05
SPHK1-202ENST00000392496 UQCR10Q9UDW1 63 aa15.34■□□□□ 0.05
SPHK1-202ENST00000392496 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.04
SPHK1-202ENST00000392496 TRAV4A0A0B4J268 109 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 P0DMU3 169 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 FAM231AP0DMU4 169 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 FAM231CP0DMU5 169 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 Q6ZN92 141 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 ERASQ7Z444 233 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 C14orf144Q96I85 54 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 DKK2Q9UBU2 259 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 TNFRSF18Q9Y5U5 241 aa15.32■□□□□ 0.04
SPHK1-202ENST00000392496 TSHBP01222 138 aa15.31■□□□□ 0.04
SPHK1-202ENST00000392496 KIR2DL5BQ8NHK3 375 aa15.31■□□□□ 0.04
SPHK1-202ENST00000392496 ZMAT4Q9H898 229 aa15.31■□□□□ 0.04
SPHK1-202ENST00000392496 TRAV12-1A0A0B4J245 112 aa15.31■□□□□ 0.04
SPHK1-202ENST00000392496 NEXN-AS1Q8NBZ9 246 aa15.3■□□□□ 0.04
SPHK1-202ENST00000392496 TP53TG1Q9Y2A0 90 aa15.3■□□□□ 0.04
SPHK1-202ENST00000392496 A0A087WX48 190 aa15.29■□□□□ 0.04
SPHK1-202ENST00000392496 NOTCH3Q9UM47 2321 aa15.29■□□□□ 0.04
SPHK1-202ENST00000392496 CIDEAO60543 219 aa15.29■□□□□ 0.04
SPHK1-202ENST00000392496 ZNF479Q96JC4 524 aa15.29■□□□□ 0.04
SPHK1-202ENST00000392496 SMIM9A6NGZ8 99 aa15.28■□□□□ 0.04
SPHK1-202ENST00000392496 APOC4P55056 127 aa15.28■□□□□ 0.04
SPHK1-202ENST00000392496 IGIPA6NJ69 53 aa15.27■□□□□ 0.04
SPHK1-202ENST00000392496 DEFB104AQ8WTQ1 72 aa15.27■□□□□ 0.04
SPHK1-202ENST00000392496 TMEM141Q96I45 108 aa15.27■□□□□ 0.04
SPHK1-202ENST00000392496 DPM2O94777 84 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 IGKCP01834 107 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 BAALCQ8WXS3 180 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 TIMM17AQ99595 171 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 RPL39P62891 51 aaKnown RBP15.26■□□□□ 0.03
SPHK1-202ENST00000392496 Q9UF83 564 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 X6R8D5 127 aa15.26■□□□□ 0.03
SPHK1-202ENST00000392496 TRBV10-1A0A0K0K1A3 114 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 GAGE12BA1L429 117 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 GAGE7O76087 117 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 GAGE12FP0CL80 117 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 GAGE12GP0CL81 117 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 GAGE12IP0CL82 117 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 C20orf203Q8NBC4 194 aa15.25■□□□□ 0.03
SPHK1-202ENST00000392496 MRPL35Q9NZE8 188 aaKnown RBP15.25■□□□□ 0.03
SPHK1-202ENST00000392496 TRGV2A0A075B6R0 118 aa15.24■□□□□ 0.03
SPHK1-202ENST00000392496 K7EQD1 137 aa15.24■□□□□ 0.03
SPHK1-202ENST00000392496 F8VRH5 84 aa15.23■□□□□ 0.03
SPHK1-202ENST00000392496 ANKRD39Q53RE8 183 aa15.23■□□□□ 0.03
SPHK1-202ENST00000392496 MRPL52Q86TS9 123 aaKnown RBP15.23■□□□□ 0.03
SPHK1-202ENST00000392496 HHLA3Q9XRX5 114 aa15.23■□□□□ 0.03
SPHK1-202ENST00000392496 PLNP26678 52 aa15.22■□□□□ 0.03
SPHK1-202ENST00000392496 HNRNPA3P51991 378 aaKnown RBP15.22■□□□□ 0.03
SPHK1-202ENST00000392496 STPG4Q8N801 248 aa15.22■□□□□ 0.03
SPHK1-202ENST00000392496 CHTOPQ9Y3Y2 248 aaKnown RBP15.22■□□□□ 0.03
SPHK1-202ENST00000392496 SLC25A34Q6PIV7 304 aa15.21■□□□□ 0.03
SPHK1-202ENST00000392496 PRSS29PA6NIE9 313 aa15.21■□□□□ 0.02
SPHK1-202ENST00000392496 LINC00612Q8N6U2 182 aa15.21■□□□□ 0.02
SPHK1-202ENST00000392496 TRBV7-3A0A075B6L6 115 aa15.2■□□□□ 0.02
SPHK1-202ENST00000392496 COX8AP10176 69 aa15.2■□□□□ 0.02
SPHK1-202ENST00000392496 RPL36AP83881 106 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms