RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 P0DMU3 169 aa10.39□□□□□ -0.75
CCDC57-203ENST00000392343 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
CCDC57-203ENST00000392343 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
CCDC57-203ENST00000392343 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 NPC2P61916 151 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 SPXQ9BT56 116 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
CCDC57-203ENST00000392343 Q8N1Y9 231 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
CCDC57-203ENST00000392343 ERG28Q9UKR5 140 aa10.38□□□□□ -0.75
CCDC57-203ENST00000392343 IGHV1-69P01742 117 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
CCDC57-203ENST00000392343 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 M0QY20 66 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 PRSS2P07478 247 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
CCDC57-203ENST00000392343 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
CCDC57-203ENST00000392343 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
CCDC57-203ENST00000392343 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
CCDC57-203ENST00000392343 NACAE9PAV3 2078 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 C10orf99Q6UWK7 81 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 Q6ZSV7 163 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 A8MZ25 164 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 LGALS9O00182 355 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 PRM2P04554 102 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 DCANP1Q8TF63 244 aa10.36□□□□□ -0.75
CCDC57-203ENST00000392343 RHODO00212 210 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 LEPROTO15243 131 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 CRLF1O75462 422 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 PROK1P58294 105 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
CCDC57-203ENST00000392343 KLRB1Q12918 225 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 USMG5Q96IX5 58 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 VCX2Q9H322 139 aa10.35□□□□□ -0.75
CCDC57-203ENST00000392343 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 IGHV4-61A0A0C4DH41 118 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 IGHG2P01859 326 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 DUX5Q96PT3 197 aa10.34□□□□□ -0.75
CCDC57-203ENST00000392343 ID1P41134 155 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 Q9UF83 564 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 TRAV4A0A0B4J268 109 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 C20orf203Q8NBC4 194 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
CCDC57-203ENST00000392343 UTP20O75691 2785 aaKnown RBP10.32□□□□□ -0.76
CCDC57-203ENST00000392343 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 KNCNA6PVL3 124 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 TRIAP1O43715 76 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 IGHV3-30-3P0DP02 117 aa10.32□□□□□ -0.76
CCDC57-203ENST00000392343 TRBV7-9A0A0J9YWB2 115 aa10.31□□□□□ -0.76
CCDC57-203ENST00000392343 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
CCDC57-203ENST00000392343 LY6DQ14210 128 aa10.31□□□□□ -0.76
CCDC57-203ENST00000392343 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
CCDC57-203ENST00000392343 LINC01620Q4KN68 170 aa10.31□□□□□ -0.76
CCDC57-203ENST00000392343 I3L3M4 83 aa10.3□□□□□ -0.76
CCDC57-203ENST00000392343 CD28P10747 220 aa10.3□□□□□ -0.76
CCDC57-203ENST00000392343 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
CCDC57-203ENST00000392343 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
CCDC57-203ENST00000392343 B5MCH6 92 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 M0R2P5 195 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 A0A0B4J2C4 111 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 A0A0J9YX75 114 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 A6NDX4 124 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 DAND5Q8N907 189 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 ITPR1Q14643 2758 aa10.29□□□□□ -0.76
CCDC57-203ENST00000392343 SNCGO76070 127 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 RHOHQ15669 191 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 NOTCH3Q9UM47 2321 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
CCDC57-203ENST00000392343 GAGE2BQ13066 116 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 CITED1Q99966 193 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
CCDC57-203ENST00000392343 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.77
CCDC57-203ENST00000392343 SYNJ2BPP57105 145 aa10.27□□□□□ -0.77
CCDC57-203ENST00000392343 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
CCDC57-203ENST00000392343 AVPP01185 164 aa10.27□□□□□ -0.77
CCDC57-203ENST00000392343 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.77
CCDC57-203ENST00000392343 LITAFQ99732 161 aa10.27□□□□□ -0.77
CCDC57-203ENST00000392343 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
CCDC57-203ENST00000392343 H3BUA1 57 aa10.26□□□□□ -0.77
CCDC57-203ENST00000392343 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
CCDC57-203ENST00000392343 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms