RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
VPS9D1-201ENST00000389386 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 IGF1P05019 195 aa11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
VPS9D1-201ENST00000389386 TMEM223A0PJW6 202 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 ZFHX3Q15911 3703 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 FAM236AA0A1B0GUQ0 79 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 FAM236BA0A1B0GV22 79 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 NDUFA7O95182 113 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 IGHV3OR16-13A0A075B7E8 117 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 IGHV3-74A0A0B4J1X5 117 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 CLPSL1A2RUU4 121 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
VPS9D1-201ENST00000389386 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
VPS9D1-201ENST00000389386 HES1Q14469 280 aa11□□□□□ -0.65
VPS9D1-201ENST00000389386 POLR2KP53803 58 aaKnown RBP10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 DOPEY1Q5JWR5 2465 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 A0A1W2PPR1 153 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 OOSP1A8MZH6 123 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 FBXL19-AS1Q494R0 122 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 C9orf153Q5TBE3 101 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 METTL26Q96S19 204 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 ICOSQ9Y6W8 199 aa10.99□□□□□ -0.65
VPS9D1-201ENST00000389386 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 A0A087WW49 117 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 C19orf84I3L1E1 186 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 UBE2E1P51965 193 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 LINC00315P59091 139 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 ITLN2Q8WWU7 325 aaPredicted RBP10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
VPS9D1-201ENST00000389386 A0A0J9YX75 114 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 NPFFO15130 113 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 LRRC75A-AS1Q8N1F1 130 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 ZFAND2AQ8N6M9 145 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 LENEPQ9Y5L5 61 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 CSMD2Q7Z408 3487 aa10.97□□□□□ -0.65
VPS9D1-201ENST00000389386 IGHV3-49A0A0A0MS15 119 aa10.96□□□□□ -0.65
VPS9D1-201ENST00000389386 A0A0J9YXY3 114 aa10.96□□□□□ -0.65
VPS9D1-201ENST00000389386 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.65
VPS9D1-201ENST00000389386 VCYO14598 125 aa10.96□□□□□ -0.65
VPS9D1-201ENST00000389386 HERVK_113P63121 156 aa10.96□□□□□ -0.65
VPS9D1-201ENST00000389386 J3KT08 172 aa10.96□□□□□ -0.66
VPS9D1-201ENST00000389386 CLEC2BQ92478 149 aa10.96□□□□□ -0.66
VPS9D1-201ENST00000389386 IGHV3-64A0A075B6Q5 118 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 UQCRQO14949 82 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 LST1O00453 97 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 COX6CP09669 75 aa10.95□□□□□ -0.66
VPS9D1-201ENST00000389386 LITAFQ99732 161 aa10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 CELSR2Q9HCU4 2923 aa10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 GNRH2O43555 120 aa10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 C15orf32Q32M92 178 aa10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
VPS9D1-201ENST00000389386 C20orf173Q96LM9 149 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 MUC4Q99102 2169 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 ZNF580Q9UK33 172 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 A0A1B0GX51 115 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 ACYP1P07311 99 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 PRSS2P07478 247 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
VPS9D1-201ENST00000389386 F5H768 121 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 NXPH4O95158 308 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 IGHV1-69P01742 117 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 C16orf92Q96LL3 132 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 POLQO75417 2590 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 Q6ZSV7 163 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
VPS9D1-201ENST00000389386 I3L3M4 83 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 U3KQE9 123 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 UBR5O95071 2799 aaPredicted RBP10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 ADAMTSL4-AS1Q5T5F5 129 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 C11orf71Q6IPW1 123 aa10.91□□□□□ -0.66
VPS9D1-201ENST00000389386 IGHV7-81A0A0B4J1V7 117 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 LINC00643Q86TS7 51 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 JPT2Q9H910 190 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 LINC00527Q9UJ94 153 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 Q8N6K4 173 aa10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 ZNF256Q9Y2P7 627 aaPredicted RBP10.9□□□□□ -0.66
VPS9D1-201ENST00000389386 ZFP36P26651 326 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms