RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 BAALCQ8WXS3 180 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
SGCB-201ENST00000381431 C19orf84I3L1E1 186 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 CRIP1P50238 77 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 GPHB5Q86YW7 130 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 DAND5Q8N907 189 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 OVOL2Q9BRP0 275 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 EDA2RQ9HAV5 297 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 ZNF561-AS1K7EIQ3 104 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 MUSTN1Q8IVN3 82 aa13.08□□□□□ -0.32
SGCB-201ENST00000381431 K7EMT4 169 aa13.07□□□□□ -0.32
SGCB-201ENST00000381431 CRYGBP07316 175 aa13.07□□□□□ -0.32
SGCB-201ENST00000381431 J3QKU1 62 aa13.07□□□□□ -0.32
SGCB-201ENST00000381431 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
SGCB-201ENST00000381431 ESM1Q9NQ30 184 aa13.06□□□□□ -0.32
SGCB-201ENST00000381431 RS1O15537 224 aa13.06□□□□□ -0.32
SGCB-201ENST00000381431 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
SGCB-201ENST00000381431 Q6ZQT7 251 aa13.05□□□□□ -0.32
SGCB-201ENST00000381431 SPATA12Q7Z6I5 190 aa13.05□□□□□ -0.32
SGCB-201ENST00000381431 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
SGCB-201ENST00000381431 SOCS3O14543 225 aa13.05□□□□□ -0.32
SGCB-201ENST00000381431 IGLC6P0CF74 106 aa13.05□□□□□ -0.32
SGCB-201ENST00000381431 A0A0J9YX75 114 aa13.04□□□□□ -0.32
SGCB-201ENST00000381431 TOMM6Q96B49 74 aa13.04□□□□□ -0.32
SGCB-201ENST00000381431 E9PLD3 99 aa13.04□□□□□ -0.32
SGCB-201ENST00000381431 HIGD1BQ9P298 99 aa13.04□□□□□ -0.32
SGCB-201ENST00000381431 A6NDX4 124 aa13.04□□□□□ -0.32
SGCB-201ENST00000381431 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
SGCB-201ENST00000381431 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
SGCB-201ENST00000381431 UBE2DNLQ8IWF7 75 aa13.03□□□□□ -0.32
SGCB-201ENST00000381431 TRAV12-1A0A0B4J245 112 aa13.03□□□□□ -0.32
SGCB-201ENST00000381431 ACANP16112 2415 aa13.03□□□□□ -0.32
SGCB-201ENST00000381431 MYCNOSP40205 109 aa13.02□□□□□ -0.32
SGCB-201ENST00000381431 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
SGCB-201ENST00000381431 LY6LH3BQJ8 138 aa13.02□□□□□ -0.33
SGCB-201ENST00000381431 RANBP2P49792 3224 aaKnown RBP13.02□□□□□ -0.33
SGCB-201ENST00000381431 TRAV13-2A0A0B4J235 113 aa13.02□□□□□ -0.33
SGCB-201ENST00000381431 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
SGCB-201ENST00000381431 PSCAO43653 123 aa13.01□□□□□ -0.33
SGCB-201ENST00000381431 TIMM17AQ99595 171 aa13.01□□□□□ -0.33
SGCB-201ENST00000381431 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
SGCB-201ENST00000381431 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
SGCB-201ENST00000381431 P0DMU3 169 aa13□□□□□ -0.33
SGCB-201ENST00000381431 FAM231AP0DMU4 169 aa13□□□□□ -0.33
SGCB-201ENST00000381431 FAM231CP0DMU5 169 aa13□□□□□ -0.33
SGCB-201ENST00000381431 APOC4P55056 127 aa13□□□□□ -0.33
SGCB-201ENST00000381431 HAMPP81172 84 aa13□□□□□ -0.33
SGCB-201ENST00000381431 C20orf203Q8NBC4 194 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 GYPEP15421 78 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 IGLV2-11P01706 119 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 PTH2Q96A98 100 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
SGCB-201ENST00000381431 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
SGCB-201ENST00000381431 BAALC-AS2P0C853 105 aa12.98□□□□□ -0.33
SGCB-201ENST00000381431 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
SGCB-201ENST00000381431 C20orf173Q96LM9 149 aa12.98□□□□□ -0.33
SGCB-201ENST00000381431 CRLF1O75462 422 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 TRBV7-3A0A075B6L6 115 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 IGKV2D-26A0A0A0MRZ7 120 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 PRSS47A8MTI9 375 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 EBI3Q14213 229 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 TRAV4A0A0B4J268 109 aa12.97□□□□□ -0.33
SGCB-201ENST00000381431 TNFRSF13BO14836 293 aaPredicted RBP12.97□□□□□ -0.33
SGCB-201ENST00000381431 K7EQD1 137 aa12.96□□□□□ -0.33
SGCB-201ENST00000381431 PIFOQ8TCI5 191 aa12.96□□□□□ -0.33
SGCB-201ENST00000381431 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
SGCB-201ENST00000381431 CRYBA4P53673 196 aa12.96□□□□□ -0.34
SGCB-201ENST00000381431 CDSNQ15517 529 aa12.96□□□□□ -0.34
SGCB-201ENST00000381431 ATP6V0E2Q8NHE4 81 aa12.96□□□□□ -0.34
SGCB-201ENST00000381431 DEFB4AO15263 64 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 IGHG4P01861 327 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
SGCB-201ENST00000381431 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 TEN1Q86WV5 123 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 IFITM1P13164 125 aa12.95□□□□□ -0.34
SGCB-201ENST00000381431 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
SGCB-201ENST00000381431 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
SGCB-201ENST00000381431 IGHV3-30-3P0DP02 117 aa12.94□□□□□ -0.34
SGCB-201ENST00000381431 UBL5Q9BZL1 73 aa12.94□□□□□ -0.34
SGCB-201ENST00000381431 LRP4O75096 1905 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 LINC00310P59036 64 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 HIST2H2BCQ6DN03 193 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 DAZ2Q13117 558 aaKnown RBP12.93□□□□□ -0.34
SGCB-201ENST00000381431 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
SGCB-201ENST00000381431 VSIG2Q96IQ7 327 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
SGCB-201ENST00000381431 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
SGCB-201ENST00000381431 NKAPP1Q8N9T2 125 aa12.92□□□□□ -0.34
SGCB-201ENST00000381431 GAS8-AS1O95177 125 aa12.92□□□□□ -0.34
SGCB-201ENST00000381431 FSTL3O95633 263 aa12.92□□□□□ -0.34
SGCB-201ENST00000381431 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms