RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 Q6ZWC4 215 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 Q8N8P6 123 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 RNF183Q96D59 192 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 OVOL2Q9BRP0 275 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 SMIM2Q9BVW6 85 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 ST20Q9HBF5 79 aa5.71□□□□□ -1.49
ERCC8-202ENST00000381118 SDHAF1A6NFY7 115 aa5.71□□□□□ -1.5
ERCC8-202ENST00000381118 RHODO00212 210 aa5.71□□□□□ -1.5
ERCC8-202ENST00000381118 KRTDAPP60985 99 aa5.71□□□□□ -1.5
ERCC8-202ENST00000381118 DEFB121Q5J5C9 76 aa5.71□□□□□ -1.5
ERCC8-202ENST00000381118 FAM222AQ5U5X8 452 aa5.71□□□□□ -1.5
ERCC8-202ENST00000381118 A0A096LNJ9 63 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 TRAV4A0A0B4J268 109 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 A8MZ25 164 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 LEPROTL1O95214 131 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 PPP1R17O96001 155 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 PYY3Q5JQD4 70 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 C20orf78Q9BR46 151 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 TMEM70Q9BUB7 260 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 H0Y8G0 127 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 H7C1H1 209 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 BTF3P20290 206 aaKnown RBP5.7□□□□□ -1.5
ERCC8-202ENST00000381118 Q8NAQ8 132 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 MRAPQ8TCY5 172 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 NDUFAF3Q9BU61 184 aa5.7□□□□□ -1.5
ERCC8-202ENST00000381118 K7EIL1 84 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 HBDP02042 147 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 MIFP14174 115 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 LAGE3Q14657 143 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 C12orf57Q99622 126 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 TENM3Q9P273 2699 aa5.69□□□□□ -1.5
ERCC8-202ENST00000381118 TRGV4A0A0C4DH28 118 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 IGHV3-38A0A0C4DH36 116 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 NUDT3O95989 172 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
ERCC8-202ENST00000381118 SLC25A29Q8N8R3 303 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 NEXN-AS1Q8NBZ9 246 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 TRBV6-5A0A0K0K1A5 114 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 K7EQD1 137 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 SBSPONQ8IVN8 264 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 PHLDA1Q8WV24 401 aaPredicted RBP5.68□□□□□ -1.5
ERCC8-202ENST00000381118 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 DKK2Q9UBU2 259 aa5.68□□□□□ -1.5
ERCC8-202ENST00000381118 TRBV27A0A0K0K1C4 114 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 LINC01546A6NGU7 62 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 VCYO14598 125 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 SMIM6P0DI80 62 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 FCER1GP30273 86 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 ZNRF2Q8NHG8 242 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 EDA2RQ9HAV5 297 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 HUWE1Q7Z6Z7 4374 aaKnown RBP5.67□□□□□ -1.5
ERCC8-202ENST00000381118 GAGE12JA6NER3 117 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 LYRM9A8MSI8 78 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 DAD1P61803 113 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 GAGE1Q13065 139 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 GAGE4Q13068 117 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 GAGE5Q13069 117 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 FHL2Q14192 279 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 JOSD1Q15040 202 aaPredicted RBP5.67□□□□□ -1.5
ERCC8-202ENST00000381118 GAGE13Q4V321 117 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
ERCC8-202ENST00000381118 I3L3M4 83 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
ERCC8-202ENST00000381118 LINC00612Q8N6U2 182 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 MAP1LC3CQ9BXW4 147 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
ERCC8-202ENST00000381118 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 SPATA12Q7Z6I5 190 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 TP53TG1Q9Y2A0 90 aa5.66□□□□□ -1.5
ERCC8-202ENST00000381118 TRBV7-3A0A075B6L6 115 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 TSHBP01222 138 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 HTN3P15516 51 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 RPL32P62910 135 aaKnown RBP5.65□□□□□ -1.5
ERCC8-202ENST00000381118 RPL36AP83881 106 aaKnown RBP5.65□□□□□ -1.5
ERCC8-202ENST00000381118 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 RPL36ALQ969Q0 106 aaKnown RBP5.65□□□□□ -1.5
ERCC8-202ENST00000381118 PMCHL2Q9BQD1 86 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 HHLA3Q9XRX5 114 aa5.65□□□□□ -1.5
ERCC8-202ENST00000381118 TRBV6-4A0A1B0GX49 114 aa5.64□□□□□ -1.51
ERCC8-202ENST00000381118 K7EMI3 77 aa5.64□□□□□ -1.51
ERCC8-202ENST00000381118 RHOHQ15669 191 aa5.64□□□□□ -1.51
ERCC8-202ENST00000381118 IFI27L1Q96BM0 104 aa5.64□□□□□ -1.51
ERCC8-202ENST00000381118 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms