RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 KLLNB2CW77 178 aa14.56□□□□□ -0.08
FOXC1-201ENST00000380874 TRPT1Q86TN4 253 aaKnown RBP14.56□□□□□ -0.08
FOXC1-201ENST00000380874 UBE2E2Q96LR5 201 aa14.56□□□□□ -0.08
FOXC1-201ENST00000380874 BBC3Q96PG8 261 aaPredicted RBP14.56□□□□□ -0.08
FOXC1-201ENST00000380874 LINC01549A6NIU2 74 aa14.56□□□□□ -0.08
FOXC1-201ENST00000380874 APRG1Q8IVJ8 170 aa14.56□□□□□ -0.08
FOXC1-201ENST00000380874 TRAV2A0A0B4J234 112 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 IGLL5B9A064 214 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 K7EQG2 157 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 PEMTQ9UBM1 199 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 J3QLI3 93 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 KLK9Q2XQG4 91 aa14.55□□□□□ -0.08
FOXC1-201ENST00000380874 IGHV3-38A0A0C4DH36 116 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 XCL2Q9UBD3 114 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 P0DMU3 169 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 FAM231AP0DMU4 169 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 FAM231CP0DMU5 169 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 SPXQ9BT56 116 aa14.54□□□□□ -0.08
FOXC1-201ENST00000380874 PLEKHB2Q96CS7 222 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 CRYBG3Q68DQ2 2970 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 KRTAP10-9P60411 292 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 ETDBQ3ZM63 59 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 FOXI2Q6ZQN5 318 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 ITPR1Q14643 2758 aa14.53□□□□□ -0.08
FOXC1-201ENST00000380874 GAGE13Q4V321 117 aa14.52□□□□□ -0.08
FOXC1-201ENST00000380874 TRBV7-9A0A0J9YWB2 115 aa14.52□□□□□ -0.08
FOXC1-201ENST00000380874 A0A1B0GV72 72 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 E9PLD3 99 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 LINC01619G3V211 115 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 ZNF843Q8N446 348 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 TMEM141Q96I45 108 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 YAE1D1Q9NRH1 226 aa14.52□□□□□ -0.09
FOXC1-201ENST00000380874 ADARB2-AS1A8MUL3 147 aa14.51□□□□□ -0.09
FOXC1-201ENST00000380874 TMEM61Q8N0U2 210 aa14.51□□□□□ -0.09
FOXC1-201ENST00000380874 I3L3M4 83 aa14.51□□□□□ -0.09
FOXC1-201ENST00000380874 IGHV3-53P01767 116 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 TAL2Q16559 108 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 MUC4Q99102 2169 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 WFDC2Q14508 124 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 TEX48A0A1B0GUV7 120 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 PROK1P58294 105 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 TM2D2Q9BX73 214 aa14.5□□□□□ -0.09
FOXC1-201ENST00000380874 LINC01546A6NGU7 62 aa14.49□□□□□ -0.09
FOXC1-201ENST00000380874 SH2D6Q7Z4S9 175 aa14.49□□□□□ -0.09
FOXC1-201ENST00000380874 A0A0J9YXV3 536 aa14.49□□□□□ -0.09
FOXC1-201ENST00000380874 NPC2P61916 151 aa14.49□□□□□ -0.09
FOXC1-201ENST00000380874 GEMIN7Q9H840 131 aaKnown RBP14.49□□□□□ -0.09
FOXC1-201ENST00000380874 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 ZANQ9Y493 2812 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 PRSS47A8MTI9 375 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 J3QQQ9 107 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 IGHV4-31P0DP07 118 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 SMAGPQ0VAQ4 97 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 CEMP1Q6PRD7 247 aaPredicted RBP14.48□□□□□ -0.09
FOXC1-201ENST00000380874 STHQ8IWL8 128 aa14.48□□□□□ -0.09
FOXC1-201ENST00000380874 POLR2KP53803 58 aaKnown RBP14.47□□□□□ -0.09
FOXC1-201ENST00000380874 ZNF415Q09FC8 603 aa14.47□□□□□ -0.09
FOXC1-201ENST00000380874 UTP20O75691 2785 aaKnown RBP14.47□□□□□ -0.09
FOXC1-201ENST00000380874 CFHR3Q02985 330 aa14.47□□□□□ -0.09
FOXC1-201ENST00000380874 ZNF702PQ9H963 129 aa14.47□□□□□ -0.09
FOXC1-201ENST00000380874 LYRM7Q5U5X0 104 aa14.47□□□□□ -0.09
FOXC1-201ENST00000380874 DEFB113Q30KQ7 82 aa14.46□□□□□ -0.09
FOXC1-201ENST00000380874 Q6YL49 198 aa14.46□□□□□ -0.09
FOXC1-201ENST00000380874 M0QY20 66 aa14.46□□□□□ -0.09
FOXC1-201ENST00000380874 UFSP1Q6NVU6 142 aa14.46□□□□□ -0.09
FOXC1-201ENST00000380874 TRGV1A0A0A0MS02 117 aa14.46□□□□□ -0.1
FOXC1-201ENST00000380874 TMEM238C9JI98 176 aa14.46□□□□□ -0.1
FOXC1-201ENST00000380874 CRYGDP07320 174 aa14.45□□□□□ -0.1
FOXC1-201ENST00000380874 FAM19A4Q96LR4 140 aa14.45□□□□□ -0.1
FOXC1-201ENST00000380874 A0A0U1RRA0 63 aa14.45□□□□□ -0.1
FOXC1-201ENST00000380874 DLX4Q92988 240 aaPredicted RBP14.45□□□□□ -0.1
FOXC1-201ENST00000380874 KIF25-AS1Q9Y6Z4 181 aa14.44□□□□□ -0.1
FOXC1-201ENST00000380874 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.44□□□□□ -0.1
FOXC1-201ENST00000380874 IGKV2-29A2NJV5 120 aaPredicted RBP14.44□□□□□ -0.1
FOXC1-201ENST00000380874 BRI3O95415 125 aa14.44□□□□□ -0.1
FOXC1-201ENST00000380874 SIGMAR1Q99720 223 aa14.44□□□□□ -0.1
FOXC1-201ENST00000380874 SETXQ7Z333 2677 aaKnown RBP14.44□□□□□ -0.1
FOXC1-201ENST00000380874 TIMM17AQ99595 171 aa14.44□□□□□ -0.1
FOXC1-201ENST00000380874 GTSF1LQ9H1H1 148 aa14.44□□□□□ -0.1
FOXC1-201ENST00000380874 LINC00315P59091 139 aa14.43□□□□□ -0.1
FOXC1-201ENST00000380874 ATRQ13535 2644 aa14.43□□□□□ -0.1
FOXC1-201ENST00000380874 IGKV3OR2-268A0A0C4DH90 116 aa14.43□□□□□ -0.1
FOXC1-201ENST00000380874 LGALS9O00182 355 aa14.43□□□□□ -0.1
FOXC1-201ENST00000380874 TMEM89A2RUT3 159 aa14.42□□□□□ -0.1
FOXC1-201ENST00000380874 C9orf85Q96MD7 179 aa14.42□□□□□ -0.1
FOXC1-201ENST00000380874 MAST4O15021 2626 aa14.42□□□□□ -0.1
FOXC1-201ENST00000380874 INSP01308 110 aa14.42□□□□□ -0.1
FOXC1-201ENST00000380874 RHOHQ15669 191 aa14.42□□□□□ -0.1
FOXC1-201ENST00000380874 C20orf203Q8NBC4 194 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 IGIPA6NJ69 53 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 TIMM21Q9BVV7 248 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 TRBV7-3A0A075B6L6 115 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 TRBV27A0A0K0K1C4 114 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 M0R2P5 195 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 TSHBP01222 138 aa14.41□□□□□ -0.1
FOXC1-201ENST00000380874 A8MWV9 139 aa14.4□□□□□ -0.1
FOXC1-201ENST00000380874 ZNRF2Q8NHG8 242 aa14.4□□□□□ -0.1
FOXC1-201ENST00000380874 H3BMM0 161 aa14.4□□□□□ -0.1
FOXC1-201ENST00000380874 ODF3Q96PU9 254 aa14.39□□□□□ -0.11
FOXC1-201ENST00000380874 SPAG8Q99932 426 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms