RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ZNF702PQ9H963 129 aa12.03□□□□□ -0.48
VPS16-203ENST00000380469 TMEM223A0PJW6 202 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 HTN1P15515 57 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 Q6YL49 198 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 SIGMAR1Q99720 223 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 SPAG8Q99932 426 aaPredicted RBP12.02□□□□□ -0.49
VPS16-203ENST00000380469 TSSC4Q9Y5U2 329 aaPredicted RBP12.02□□□□□ -0.49
VPS16-203ENST00000380469 A0A096LNT2 108 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 SFTA2Q6UW10 78 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 AMELXQ99217 191 aa12.02□□□□□ -0.49
VPS16-203ENST00000380469 CRYBG3Q68DQ2 2970 aa12.01□□□□□ -0.49
VPS16-203ENST00000380469 FLNCQ14315 2725 aa12.01□□□□□ -0.49
VPS16-203ENST00000380469 GAGE12HA6NDE8 117 aa12.01□□□□□ -0.49
VPS16-203ENST00000380469 KNCNA6PVL3 124 aa12.01□□□□□ -0.49
VPS16-203ENST00000380469 CFC1BP0CG36 223 aa12□□□□□ -0.49
VPS16-203ENST00000380469 CFC1P0CG37 223 aa12□□□□□ -0.49
VPS16-203ENST00000380469 UBE2D3P61077 147 aa12□□□□□ -0.49
VPS16-203ENST00000380469 UBE2D2P62837 147 aa12□□□□□ -0.49
VPS16-203ENST00000380469 TMEM238C9JI98 176 aa12□□□□□ -0.49
VPS16-203ENST00000380469 RHODO00212 210 aa12□□□□□ -0.49
VPS16-203ENST00000380469 DEFB131AP59861 70 aa12□□□□□ -0.49
VPS16-203ENST00000380469 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
VPS16-203ENST00000380469 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
VPS16-203ENST00000380469 CFAP126Q5VTH2 177 aa11.99□□□□□ -0.49
VPS16-203ENST00000380469 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
VPS16-203ENST00000380469 RBMY1A1P0DJD3 496 aaKnown RBP11.99□□□□□ -0.49
VPS16-203ENST00000380469 RBMY1CP0DJD4 496 aa11.99□□□□□ -0.49
VPS16-203ENST00000380469 RBMY1FQ15415 496 aaKnown RBP11.99□□□□□ -0.49
VPS16-203ENST00000380469 EDA2RQ9HAV5 297 aa11.99□□□□□ -0.49
VPS16-203ENST00000380469 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 SLURP1P55000 103 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
VPS16-203ENST00000380469 PRO1854Q9UHT4 67 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
VPS16-203ENST00000380469 AZU1P20160 251 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 ATP6V0E2Q8NHE4 81 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
VPS16-203ENST00000380469 SORL1Q92673 2214 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 IGHV3-64A0A075B6Q5 118 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 A8MWV9 139 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 H3BMM0 161 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 FSHBP01225 129 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 CD28P10747 220 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 ZNF418Q8TF45 676 aaPredicted RBP11.97□□□□□ -0.49
VPS16-203ENST00000380469 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 C1QTNF4Q9BXJ3 329 aa11.97□□□□□ -0.49
VPS16-203ENST00000380469 M0R2P5 195 aa11.96□□□□□ -0.49
VPS16-203ENST00000380469 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
VPS16-203ENST00000380469 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
VPS16-203ENST00000380469 SMCPP49901 116 aaPredicted RBP11.95□□□□□ -0.5
VPS16-203ENST00000380469 INSL3P51460 131 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 Q5PR19 223 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 PEMTQ9UBM1 199 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 UTP20O75691 2785 aaKnown RBP11.95□□□□□ -0.5
VPS16-203ENST00000380469 SCGB1A1P11684 91 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 PROK1P58294 105 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 FOXI1Q12951 378 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 C18orf65Q6ZTR6 163 aa11.95□□□□□ -0.5
VPS16-203ENST00000380469 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 A4D1N5 150 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 A8MTW9 85 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 TCL1BO95988 128 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 IGHV4-31P0DP07 118 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 CRYBA4P53673 196 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 ZNF415Q09FC8 603 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 SPXQ9BT56 116 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
VPS16-203ENST00000380469 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
VPS16-203ENST00000380469 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
VPS16-203ENST00000380469 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
VPS16-203ENST00000380469 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
VPS16-203ENST00000380469 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
VPS16-203ENST00000380469 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
VPS16-203ENST00000380469 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
VPS16-203ENST00000380469 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
VPS16-203ENST00000380469 MUSTN1Q8IVN3 82 aa11.92□□□□□ -0.5
VPS16-203ENST00000380469 PIEZO1Q92508 2521 aa11.92□□□□□ -0.5
VPS16-203ENST00000380469 USP9YO00507 2555 aaPredicted RBP11.92□□□□□ -0.5
VPS16-203ENST00000380469 TMEM61Q8N0U2 210 aa11.92□□□□□ -0.5
VPS16-203ENST00000380469 PTH2Q96A98 100 aa11.92□□□□□ -0.5
VPS16-203ENST00000380469 LINC01587Q99440 93 aa11.92□□□□□ -0.5
VPS16-203ENST00000380469 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
VPS16-203ENST00000380469 PRM2P04554 102 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 RAX2Q96IS3 184 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 A0A0B4J2C4 111 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 A0A0J9YXY3 114 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 Q8N2B8 174 aa11.91□□□□□ -0.5
VPS16-203ENST00000380469 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
VPS16-203ENST00000380469 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
VPS16-203ENST00000380469 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
VPS16-203ENST00000380469 CEMP1Q6PRD7 247 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms