RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 IL17DQ8TAD2 202 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 IGF1P05019 195 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 LINC01620Q4KN68 170 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
CHD3-203ENST00000380358 H0YGX0 51 aa9.55□□□□□ -0.88
CHD3-203ENST00000380358 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
CHD3-203ENST00000380358 REG3AQ06141 175 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 C4orf3Q8WVX3 66 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 Q6ZUT4 128 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 LOXL1Q08397 574 aaPredicted RBP9.54□□□□□ -0.88
CHD3-203ENST00000380358 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 PROK2Q9HC23 129 aa9.54□□□□□ -0.88
CHD3-203ENST00000380358 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 SORL1Q92673 2214 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 H3BUA1 57 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 WFDC2Q14508 124 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 CACNA1HO95180 2353 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 MALRD1Q5VYJ5 2156 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 KIAA1671Q9BY89 1806 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 FRMPD3Q5JV73 1810 aa9.53□□□□□ -0.88
CHD3-203ENST00000380358 ADORA2A-AS1P86434 159 aa9.52□□□□□ -0.88
CHD3-203ENST00000380358 PTH2Q96A98 100 aa9.52□□□□□ -0.88
CHD3-203ENST00000380358 UNQ9165/PRO28630Q6UXU0 137 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 Q6ZTI0 123 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 ATOX1O00244 68 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 PRO0255Q9UI72 69 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 MYCNOSP40205 109 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 C16orf54Q6UWD8 224 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 Q6ZVQ6 151 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
CHD3-203ENST00000380358 IGFL3Q6UXB1 125 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 C17orf82Q86X59 251 aaPredicted RBP9.51□□□□□ -0.89
CHD3-203ENST00000380358 ZNF747Q9BV97 191 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 SLX1AQ9BQ83 275 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 LINC00311Q8N616 119 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 POU2AF1Q16633 256 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 CIRBP-AS1Q8TBR5 109 aa9.51□□□□□ -0.89
CHD3-203ENST00000380358 SPINK1P00995 79 aa9.5□□□□□ -0.89
CHD3-203ENST00000380358 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
CHD3-203ENST00000380358 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
CHD3-203ENST00000380358 MAP6D1Q9H9H5 199 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 ENHOQ6UWT2 76 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 U3KQA8 63 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 KAAG1Q9UBP8 84 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 FXYD2P54710 66 aa9.49□□□□□ -0.89
CHD3-203ENST00000380358 IGLV1-44P01699 117 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 C22orf34Q6ZV56 151 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 MED14OSP0DP75 135 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CHD3-203ENST00000380358 C20orf144Q9BQM9 153 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 C2orf16Q68DN1 1984 aa9.48□□□□□ -0.89
CHD3-203ENST00000380358 TRBV6-1A0A0K0K1D8 114 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 LY6LH3BQJ8 138 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 K7EIM0 57 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 PRYO14603 147 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 A6NED7 52 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 Q6ZS49 121 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
CHD3-203ENST00000380358 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 TRBV10-1A0A0K0K1A3 114 aa9.47□□□□□ -0.89
CHD3-203ENST00000380358 PLA2G2AP14555 144 aa9.46□□□□□ -0.89
CHD3-203ENST00000380358 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.89
CHD3-203ENST00000380358 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.89
CHD3-203ENST00000380358 I3L2K1 104 aa9.46□□□□□ -0.89
CHD3-203ENST00000380358 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.89
CHD3-203ENST00000380358 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
CHD3-203ENST00000380358 PIK3CD-AS1Q5SR53 167 aa9.46□□□□□ -0.9
CHD3-203ENST00000380358 PTPRQQ9UMZ3 2332 aa9.46□□□□□ -0.9
CHD3-203ENST00000380358 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.9
CHD3-203ENST00000380358 FNDC1Q4ZHG4 1894 aaPredicted RBP9.46□□□□□ -0.9
CHD3-203ENST00000380358 PRR14LQ5THK1 2151 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 PRRC2AP48634 2157 aaKnown RBP9.45□□□□□ -0.9
CHD3-203ENST00000380358 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 J3KT08 172 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
CHD3-203ENST00000380358 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
CHD3-203ENST00000380358 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 SIPA1L3O60292 1781 aaPredicted RBP9.44□□□□□ -0.9
CHD3-203ENST00000380358 CXCL5P42830 114 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 VWA8A3KMH1 1905 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 TDRG1Q3Y452 100 aa9.44□□□□□ -0.9
CHD3-203ENST00000380358 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms