RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 NF1P21359 2839 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 A0A1W2PPM0 123 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 H3BVH4 76 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 TSHBP01222 138 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-202ENST00000379996 DEFB1P60022 68 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 NSUN5P1Q3KNT7 163 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 C9orf66Q5T8R8 295 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 C3orf56Q8N813 242 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 SPATA3Q8NHX4 192 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 SPAG8Q99932 426 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-202ENST00000379996 C20orf78Q9BR46 151 aa5.68□□□□□ -1.5
CDKL5-202ENST00000379996 MRPL35Q9NZE8 188 aaKnown RBP5.68□□□□□ -1.5
CDKL5-202ENST00000379996 TIMM8BQ9Y5J9 83 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-202ENST00000379996 DPM2O94777 84 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 CRYGDP07320 174 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 CHAC1Q9BUX1 264 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 K7EQG2 157 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 A6NDN8 102 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 A8MTW9 85 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 MTORP42345 2549 aa5.67□□□□□ -1.5
CDKL5-202ENST00000379996 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 ZC2HC1BQ5TFG8 222 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 CEND1Q8N111 149 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
CDKL5-202ENST00000379996 PLNP26678 52 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 NMUP48645 174 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 TAL2Q16559 108 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
CDKL5-202ENST00000379996 ZNF256Q9Y2P7 627 aaPredicted RBP5.66□□□□□ -1.5
CDKL5-202ENST00000379996 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 SPRY2O43597 315 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 TCTAP57738 103 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.5
CDKL5-202ENST00000379996 MORN3Q6PF18 240 aaPredicted RBP5.65□□□□□ -1.5
CDKL5-202ENST00000379996 GTSCR1Q86UQ5 136 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 BAALCQ8WXS3 180 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 DUX3Q96PT4 197 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 DPH3P1Q9H4G8 78 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 DNAH3Q8TD57 4116 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 E9PLD3 99 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 F8VRH5 84 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 EGFEM1PQ0D2K5 195 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
CDKL5-202ENST00000379996 C2CD3Q4AC94 2353 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.51
CDKL5-202ENST00000379996 TRGV11A0A075B6L2 103 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 IGIPA6NJ69 53 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 F6UB75 175 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 H3BUT2 72 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 ID1P41134 155 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.51
CDKL5-202ENST00000379996 GAGE13Q4V321 117 aa5.65□□□□□ -1.51
CDKL5-202ENST00000379996 G3V4G9 280 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 DYNLRB2Q8TF09 96 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 AMELXQ99217 191 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 GNRH2O43555 120 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 SAP30O75446 220 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 H7C1H1 209 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 K7ERJ3 54 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 PCP4P48539 62 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 KPRPQ5T749 579 aaPredicted RBP5.64□□□□□ -1.51
CDKL5-202ENST00000379996 SPANXN1Q5VSR9 72 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 TMEM61Q8N0U2 210 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
CDKL5-202ENST00000379996 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
CDKL5-202ENST00000379996 NAA38Q9BRA0 125 aaKnown RBP5.63□□□□□ -1.51
CDKL5-202ENST00000379996 TRBV6-5A0A0K0K1A5 114 aa5.63□□□□□ -1.51
CDKL5-202ENST00000379996 ASIPP42127 132 aa5.63□□□□□ -1.51
CDKL5-202ENST00000379996 OR10J6PQ8NGY7 276 aa5.63□□□□□ -1.51
CDKL5-202ENST00000379996 NACAE9PAV3 2078 aa5.63□□□□□ -1.51
CDKL5-202ENST00000379996 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 SNRPD3P62318 126 aaKnown RBP5.62□□□□□ -1.51
CDKL5-202ENST00000379996 C14orf178Q8N769 122 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-202ENST00000379996 EDA2RQ9HAV5 297 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-202ENST00000379996 PRSS1P07477 247 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 GCSHP23434 173 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 FOXI2Q6ZQN5 318 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 NIPBLQ6KC79 2804 aaeCLIP5.62□□□□□ -1.51
CDKL5-202ENST00000379996 TRBV27A0A0K0K1C4 114 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 IGLL5B9A064 214 aa5.62□□□□□ -1.51
CDKL5-202ENST00000379996 IGHV3-16A0A0C4DH30 117 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 A8MZ25 164 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 SMIM13P0DJ93 91 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 AMTNQ6UX39 209 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 AGRNO00468 2067 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 RNASE4P34096 147 aaKnown RBP5.61□□□□□ -1.51
CDKL5-202ENST00000379996 UBE2D1P51668 147 aa5.61□□□□□ -1.51
CDKL5-202ENST00000379996 MAP6D1Q9H9H5 199 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms