RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PAX4O43316 350 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 PPBPP02775 128 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 GAGE1Q13065 139 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 GAGE4Q13068 117 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 GAGE5Q13069 117 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 GAGE13Q4V321 117 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
HERPUD1-203ENST00000379792 TRAV10A0A0B4J240 114 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 GYPEP15421 78 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 RHOHQ15669 191 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 ZNRF2Q8NHG8 242 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 PHLDA1Q8WV24 401 aaPredicted RBP9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
HERPUD1-203ENST00000379792 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
HERPUD1-203ENST00000379792 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
HERPUD1-203ENST00000379792 TNFRSF18Q9Y5U5 241 aa9.86□□□□□ -0.83
HERPUD1-203ENST00000379792 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
HERPUD1-203ENST00000379792 A0A096LPF7 62 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 TRBV10-1A0A0K0K1A3 114 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 SUMO2P61956 95 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
HERPUD1-203ENST00000379792 TRBV7-3A0A075B6L6 115 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 C3orf84H3BNL1 204 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 PPP1R17O96001 155 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 DNAJC30Q96LL9 226 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 MAP1LC3AQ9H492 121 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 C20orf78Q9BR46 151 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
HERPUD1-203ENST00000379792 IGLL5B9A064 214 aa9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 NUDT3O95989 172 aa9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 IFI27P40305 119 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 UBE2D3P61077 147 aa9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 UBE2D2P62837 147 aa9.82□□□□□ -0.84
HERPUD1-203ENST00000379792 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
HERPUD1-203ENST00000379792 MUC7Q8TAX7 377 aa9.81□□□□□ -0.84
HERPUD1-203ENST00000379792 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
HERPUD1-203ENST00000379792 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 PMCHP20382 165 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 RAB5BP61020 215 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 BAGE3Q86Y29 109 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 VCYO14598 125 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 TCAPO15273 167 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 ZFAND6Q6FIF0 208 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 NIT1Q86X76 327 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
HERPUD1-203ENST00000379792 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
HERPUD1-203ENST00000379792 NDUFA6P56556 154 aa9.79□□□□□ -0.84
HERPUD1-203ENST00000379792 Q0VG73 95 aa9.79□□□□□ -0.84
HERPUD1-203ENST00000379792 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 H3BNG1 76 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 I3L3M4 83 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 Q8N8P6 123 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 TSHBP01222 138 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 FA2HQ7L5A8 372 aa9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-203ENST00000379792 NUPR1O60356 82 aa9.77□□□□□ -0.85
HERPUD1-203ENST00000379792 SERF1AO75920 110 aa9.77□□□□□ -0.85
HERPUD1-203ENST00000379792 LINC00310P59036 64 aa9.77□□□□□ -0.85
HERPUD1-203ENST00000379792 DNAH7Q8WXX0 4024 aa9.77□□□□□ -0.85
HERPUD1-203ENST00000379792 LINC00614P0C842 121 aa9.76□□□□□ -0.85
HERPUD1-203ENST00000379792 FCER1GP30273 86 aa9.76□□□□□ -0.85
HERPUD1-203ENST00000379792 COTL1Q14019 142 aa9.76□□□□□ -0.85
HERPUD1-203ENST00000379792 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
HERPUD1-203ENST00000379792 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
HERPUD1-203ENST00000379792 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms