RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 PHLDA3Q9Y5J5 127 aa6.37□□□□□ -1.39
NHLRC3-201ENST00000379599 WFDC9Q8NEX5 89 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 C14orf132Q9NPU4 83 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 GVINP1Q7Z2Y8 2422 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 F5H697 171 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
NHLRC3-201ENST00000379599 COX7A2LO14548 114 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 TIMM17BO60830 172 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 MIAQ16674 131 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 NDUFA12Q9UI09 145 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 BUB3O43684 328 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 IGHV3-23P01764 117 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 HOXD3P31249 432 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 S100A7L2Q5SY68 101 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 RNASE6Q93091 150 aaKnown RBP6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 TIMM17AQ99595 171 aa6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 TPRP12270 2363 aaKnown RBP6.35□□□□□ -1.39
NHLRC3-201ENST00000379599 MRGPRG-AS1Q2M3A8 158 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 LITAFQ99732 161 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 HES7Q9BYE0 225 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 PTPRZ1P23471 2315 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 CNOT1A5YKK6 2376 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 K7EIM0 57 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 CD59P13987 128 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 MRPS21P82921 87 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 SLC25A15Q9Y619 301 aa6.34□□□□□ -1.39
NHLRC3-201ENST00000379599 BDP1A6H8Y1 2624 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 A0A0J9YX75 114 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 A8MZ25 164 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 PPP1R17O96001 155 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 ASPMQ8IZT6 3477 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV3OR16-13A0A075B7E8 117 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV3-74A0A0B4J1X5 117 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 TEX22C9J3V5 150 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 TRBV12-3P01733 135 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV1-2P23083 117 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 SNURFQ9Y675 71 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 VCYO14598 125 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 PRB3Q04118 309 aaPredicted RBP6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 GAFA1Q96PS6 74 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 SMAD5-AS1Q9Y6J3 95 aa6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 RIF1Q5UIP0 2472 aaKnown RBP6.33□□□□□ -1.4
NHLRC3-201ENST00000379599 TRBV7-6A0A0J9YX20 115 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 EPM2AB3EWF7 344 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 H7BZZ5 65 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 LHBP01229 141 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 LPAL2Q16609 132 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 SOSTDC1Q6X4U4 206 aa6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 RP1L1Q8IWN7 2480 aaPredicted RBP6.32□□□□□ -1.4
NHLRC3-201ENST00000379599 GPHB5Q86YW7 130 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 TMEM89A2RUT3 159 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 FOLR3P41439 243 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 SNRPD3P62318 126 aaKnown RBP6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 CNEP1R1Q8N9A8 125 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 PTPRQQ9UMZ3 2332 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 CCKP06307 115 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 TMEM30BQ3MIR4 351 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 Q96MF0 132 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 U3KQE9 123 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
NHLRC3-201ENST00000379599 F8WEM9 126 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 Q8N2B8 174 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 CACNA1HO95180 2353 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 A0A087WWL8 130 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV5-10-1A0A0J9YXX1 117 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 FAM218AQ96MZ4 157 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 BPESC1Q9GZL8 116 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 DEFB127Q9H1M4 99 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 ENHOQ6UWT2 76 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 RMI2Q96E14 147 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 MOB4Q9Y3A3 225 aa6.3□□□□□ -1.4
NHLRC3-201ENST00000379599 TRBV27A0A0K0K1C4 114 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 Q0VFX4 171 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 CACNA1GO43497 2377 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 IGF1P05019 195 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 ROS1P08922 2347 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 RNASE13Q5GAN3 156 aaKnown RBP6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 C9orf129Q5T035 196 aaKnown RBP6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 FAM74A4Q5TZK3 123 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 FAM222AQ5U5X8 452 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 VSIG2Q96IQ7 327 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 TTTY12Q9BZ98 90 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms