RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 OR10J6PQ8NGY7 276 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 PRELID3AQ96N28 172 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 TP73-AS1Q9UF72 201 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 A0A1B0GXF2 115 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 F8W1H4 67 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 NDUFA4O00483 81 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 NDUFA7O95182 113 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 CKS2P33552 79 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-201ENST00000379433 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 SIGLEC8Q9NYZ4 499 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 IFI27P40305 119 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-201ENST00000379433 Q0VG73 95 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 A0A087WWL8 130 aa8.16□□□□□ -1.1
NEDD9-201ENST00000379433 KMT2BQ9UMN6 2715 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-201ENST00000379433 PLA2G2AP14555 144 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 IGLL1P15814 213 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 GPHB5Q86YW7 130 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 OR8A1Q8NGG7 326 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 IGKV3D-20A0A0C4DH25 116 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 IGHV7-4-1A0A0J9YVY3 117 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 HOXD3P31249 432 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-201ENST00000379433 CD164Q04900 197 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.1
NEDD9-201ENST00000379433 GNRH2O43555 120 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 PSMB8P28062 276 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 F8P00451 2351 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 TRAV12-3A0A0B4J271 114 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 PRM2P04554 102 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 FGF6P10767 208 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 EBLN2Q6P2I7 272 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 Q6YL49 198 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 RASL10AQ92737 203 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
NEDD9-201ENST00000379433 CCL24O00175 119 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 SERTAD4-AS1Q5TG53 156 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 SAMD5Q5TGI4 173 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 PMAIP1Q13794 54 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 SPATA12Q7Z6I5 190 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 ZNF702PQ9H963 129 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 AKAP9Q99996 3911 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 IGHV1-24A0A0C4DH33 117 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 MGPP08493 103 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 PFN2P35080 140 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 MRPL51Q4U2R6 128 aaKnown RBP8.13□□□□□ -1.11
NEDD9-201ENST00000379433 GFRA4Q9GZZ7 299 aa8.13□□□□□ -1.11
NEDD9-201ENST00000379433 SPINK13Q1W4C9 94 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 MRPL55Q7Z7F7 128 aaKnown RBP8.12□□□□□ -1.11
NEDD9-201ENST00000379433 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 KLK9Q9UKQ9 250 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 HIVEP1P15822 2718 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 NPYP01303 97 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 FOXI1Q12951 378 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 KRTAP1-3Q8IUG1 177 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 Q8N976 141 aa8.12□□□□□ -1.11
NEDD9-201ENST00000379433 FAM74A4Q5TZK3 123 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 C14orf178Q8N769 122 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-201ENST00000379433 VWFP04275 2813 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 Q5XG85 94 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 PHLDA3Q9Y5J5 127 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 U3KQE9 123 aa8.11□□□□□ -1.11
NEDD9-201ENST00000379433 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 KNCNA6PVL3 124 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEDD9-201ENST00000379433 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 J3QQQ9 107 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 GAGE13Q4V321 117 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
NEDD9-201ENST00000379433 IGHV3OR16-12A0A075B7B8 117 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 CD7P09564 240 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 Q9UF83 564 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 F5H697 171 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 CFHR3Q02985 330 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 FHL3Q13643 280 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 ESM1Q9NQ30 184 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 H7C1H1 209 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 FOXC2Q99958 501 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 PYGO1Q9Y3Y4 419 aa8.09□□□□□ -1.11
NEDD9-201ENST00000379433 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms