RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 DEFB131AP59861 70 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 SH2D6Q7Z4S9 175 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 VCX2Q9H322 139 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
TDP2-202ENST00000378198 CSPG4Q6UVK1 2322 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 SLURP1P55000 103 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 Q5PR19 223 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 CR1P17927 2039 aa13.34□□□□□ -0.27
TDP2-202ENST00000378198 RHODO00212 210 aa13.34□□□□□ -0.27
TDP2-202ENST00000378198 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
TDP2-202ENST00000378198 UBE2D3P61077 147 aa13.34□□□□□ -0.27
TDP2-202ENST00000378198 UBE2D2P62837 147 aa13.34□□□□□ -0.27
TDP2-202ENST00000378198 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
TDP2-202ENST00000378198 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.27
TDP2-202ENST00000378198 H3BMM0 161 aa13.33□□□□□ -0.27
TDP2-202ENST00000378198 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.27
TDP2-202ENST00000378198 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.27
TDP2-202ENST00000378198 MTURNQ8N3F0 131 aa13.33□□□□□ -0.28
TDP2-202ENST00000378198 SPAG8Q99932 426 aaPredicted RBP13.33□□□□□ -0.28
TDP2-202ENST00000378198 PEMTQ9UBM1 199 aa13.33□□□□□ -0.28
TDP2-202ENST00000378198 A8MWV9 139 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 CFC1BP0CG36 223 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 CFC1P0CG37 223 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 HTN1P15515 57 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 Q8N2B8 174 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 DUX3Q96PT4 197 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 DOPEY1Q5JWR5 2465 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 DOPEY2Q9Y3R5 2298 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 M0R2P5 195 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 CRYBA4P53673 196 aa13.32□□□□□ -0.28
TDP2-202ENST00000378198 PKD1L2Q7Z442 2459 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 PSMB2P49721 201 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 DEFB136Q30KP8 78 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 C18orf65Q6ZTR6 163 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 PTH2Q96A98 100 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 TNFRSF18Q9Y5U5 241 aa13.31□□□□□ -0.28
TDP2-202ENST00000378198 SPG11Q96JI7 2443 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 RBMY1BA6NDE4 496 aaKnown RBP13.3□□□□□ -0.28
TDP2-202ENST00000378198 RBMY1EA6NEQ0 496 aaKnown RBP13.3□□□□□ -0.28
TDP2-202ENST00000378198 RBMY1DP0C7P1 496 aaKnown RBP13.3□□□□□ -0.28
TDP2-202ENST00000378198 ZNF415Q09FC8 603 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 C10orf126Q8N4M7 172 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 TSSC4Q9Y5U2 329 aaPredicted RBP13.3□□□□□ -0.28
TDP2-202ENST00000378198 IGHV3-73A0A0B4J1V6 119 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 ATP6V0E2Q8NHE4 81 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
TDP2-202ENST00000378198 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
TDP2-202ENST00000378198 CD28P10747 220 aa13.29□□□□□ -0.28
TDP2-202ENST00000378198 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
TDP2-202ENST00000378198 TRBV20-1A0A075B6N2 111 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 PROK1P58294 105 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 TMEM61Q8N0U2 210 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 SIGMAR1Q99720 223 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 SFTA2Q6UW10 78 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 C4orf3Q8WVX3 66 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 SPATA25Q9BR10 227 aa13.28□□□□□ -0.28
TDP2-202ENST00000378198 SMCPP49901 116 aaPredicted RBP13.27□□□□□ -0.28
TDP2-202ENST00000378198 LINC00467Q9BRT7 94 aa13.27□□□□□ -0.28
TDP2-202ENST00000378198 TMEM238C9JI98 176 aa13.27□□□□□ -0.29
TDP2-202ENST00000378198 MRPS36P82909 103 aaKnown RBP13.27□□□□□ -0.29
TDP2-202ENST00000378198 C1QTNF4Q9BXJ3 329 aa13.27□□□□□ -0.29
TDP2-202ENST00000378198 SORL1Q92673 2214 aa13.26□□□□□ -0.29
TDP2-202ENST00000378198 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
TDP2-202ENST00000378198 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
TDP2-202ENST00000378198 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
TDP2-202ENST00000378198 A4D1N5 150 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 DYNLRB2Q8TF09 96 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 RAX2Q96IS3 184 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
TDP2-202ENST00000378198 TCL1BO95988 128 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 SCGB1A1P11684 91 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 FOXI1Q12951 378 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 SPXQ9BT56 116 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 TIMM21Q9BVV7 248 aa13.25□□□□□ -0.29
TDP2-202ENST00000378198 PRM2P04554 102 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 INSL3P51460 131 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 LRRC75A-AS1Q8N1F1 130 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 DNAJC30Q96LL9 226 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 LINC01587Q99440 93 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 A0A0B4J2C4 111 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 AZU1P20160 251 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 CHCHD7Q9BUK0 85 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
TDP2-202ENST00000378198 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.23□□□□□ -0.29
TDP2-202ENST00000378198 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
TDP2-202ENST00000378198 DEFB114Q30KQ6 69 aa13.23□□□□□ -0.29
TDP2-202ENST00000378198 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
TDP2-202ENST00000378198 C11orf72Q8NBR9 251 aa13.23□□□□□ -0.29
TDP2-202ENST00000378198 ZNF418Q8TF45 676 aaPredicted RBP13.23□□□□□ -0.29
TDP2-202ENST00000378198 CELSR2Q9HCU4 2923 aa13.23□□□□□ -0.29
TDP2-202ENST00000378198 SCGB1C2P0DMR2 95 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 KHDC1LQ5JSQ8 128 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 Q6ZSN1 163 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms