RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ARTNQ5T4W7 220 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
VPS13A-204ENST00000376634 C17orf77Q96MU5 243 aa9.72□□□□□ -0.85
VPS13A-204ENST00000376634 ZNF747Q9BV97 191 aa9.72□□□□□ -0.85
VPS13A-204ENST00000376634 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
VPS13A-204ENST00000376634 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
VPS13A-204ENST00000376634 A4D1N5 150 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 KIR2DL5BA0A0G2JN68 375 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 KIR2DL5BA0A0G2JPC4 375 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 KIR2DL5AQ8N109 375 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 TRBV10-2A0A0K0K1G8 114 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 FAM110AQ9BQ89 295 aa9.71□□□□□ -0.85
VPS13A-204ENST00000376634 AGPAT4-IT1Q9H0P7 198 aa9.71□□□□□ -0.86
VPS13A-204ENST00000376634 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
VPS13A-204ENST00000376634 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
VPS13A-204ENST00000376634 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
VPS13A-204ENST00000376634 MPLKIPQ8TAP9 179 aa9.7□□□□□ -0.86
VPS13A-204ENST00000376634 PRSS33Q8NF86 280 aa9.7□□□□□ -0.86
VPS13A-204ENST00000376634 FGF23Q9GZV9 251 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-204ENST00000376634 USP17L23D6RBM5 183 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 NPBQ8NG41 125 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 CRIPAKQ8N1N5 446 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 DEFB113Q30KQ7 82 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
VPS13A-204ENST00000376634 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 USP9YO00507 2555 aaPredicted RBP9.68□□□□□ -0.86
VPS13A-204ENST00000376634 Q8N1Y9 231 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 CLEC2BQ92478 149 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 WI2-2373I1.2A0A1W2PRP0 233 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 FOXI1Q12951 378 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 FHL1Q13642 323 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 RNF138Q8WVD3 245 aa9.68□□□□□ -0.86
VPS13A-204ENST00000376634 C3orf22Q8N5N4 141 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 LECT2O14960 151 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 TOMM6Q96B49 74 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 TRAV23DV6A0A075B6W5 121 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 FAM215AQ9Y5M1 114 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
VPS13A-204ENST00000376634 HIGD1BQ9P298 99 aa9.67□□□□□ -0.86
VPS13A-204ENST00000376634 GATA1P15976 413 aaPredicted RBP9.67□□□□□ -0.86
VPS13A-204ENST00000376634 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
VPS13A-204ENST00000376634 POLQO75417 2590 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 IGHV4-38-2P0DP08 117 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 COX7BP24311 80 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 PRR20EP86478 221 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 PRR20CP86479 221 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 PRR20DP86480 221 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 PRR20BP86481 221 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 PRR20AP86496 221 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 IL17DQ8TAD2 202 aa9.66□□□□□ -0.86
VPS13A-204ENST00000376634 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 ZNF503-AS2A6NEH8 195 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 H3BT86 120 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
VPS13A-204ENST00000376634 WFDC2Q14508 124 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.86
VPS13A-204ENST00000376634 COL27A1Q8IZC6 1860 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-204ENST00000376634 C5orf56Q8N8D9 126 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 G3V4G9 280 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 Q6ZUT4 128 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 KLK12Q9UKR0 248 aa9.65□□□□□ -0.86
VPS13A-204ENST00000376634 A0A0U1RQV1 116 aa9.65□□□□□ -0.87
VPS13A-204ENST00000376634 IGHV7-81A0A0B4J1V7 117 aa9.65□□□□□ -0.87
VPS13A-204ENST00000376634 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.87
VPS13A-204ENST00000376634 ESM1Q9NQ30 184 aa9.65□□□□□ -0.87
VPS13A-204ENST00000376634 V9GYY9 64 aa9.64□□□□□ -0.87
VPS13A-204ENST00000376634 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
VPS13A-204ENST00000376634 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
VPS13A-204ENST00000376634 NDUFC2-KCTD14E9PQ53 114 aa9.64□□□□□ -0.87
VPS13A-204ENST00000376634 BPY2O14599 106 aa9.64□□□□□ -0.87
VPS13A-204ENST00000376634 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
VPS13A-204ENST00000376634 C1orf147Q96MC9 270 aaPredicted RBP9.64□□□□□ -0.87
VPS13A-204ENST00000376634 SPRY2O43597 315 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 FXYD2P54710 66 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 PROK2Q9HC23 129 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 AJUBAQ96IF1 538 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 CTRLP40313 264 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 DEFB4AO15263 64 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
VPS13A-204ENST00000376634 IGLV11-55A0A075B6I3 123 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 K7EIM0 57 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 U3KQA8 63 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 ATP5EP2Q5VTU8 51 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
VPS13A-204ENST00000376634 I3L2K1 104 aa9.61□□□□□ -0.87
VPS13A-204ENST00000376634 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
VPS13A-204ENST00000376634 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
VPS13A-204ENST00000376634 WISP1O95388 367 aa9.61□□□□□ -0.87
VPS13A-204ENST00000376634 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms