RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 RPL36AP83881 106 aaKnown RBP16.07■□□□□ 0.16
HLA-C-202ENST00000376237 NRACQ8N912 160 aa16.07■□□□□ 0.16
HLA-C-202ENST00000376237 PHLDA1Q8WV24 401 aaPredicted RBP16.07■□□□□ 0.16
HLA-C-202ENST00000376237 RPL36ALQ969Q0 106 aaKnown RBP16.07■□□□□ 0.16
HLA-C-202ENST00000376237 VSIG2Q96IQ7 327 aa16.07■□□□□ 0.16
HLA-C-202ENST00000376237 TRBV6-5A0A0K0K1A5 114 aa16.06■□□□□ 0.16
HLA-C-202ENST00000376237 TNFRSF6BO95407 300 aa16.06■□□□□ 0.16
HLA-C-202ENST00000376237 TNFRSF18Q9Y5U5 241 aa16.06■□□□□ 0.16
HLA-C-202ENST00000376237 TRBV7-3A0A075B6L6 115 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 P0DMU3 169 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 FAM231AP0DMU4 169 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 FAM231CP0DMU5 169 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 NEXN-AS1Q8NBZ9 246 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 RPL39LQ96EH5 51 aaKnown RBP16.05■□□□□ 0.16
HLA-C-202ENST00000376237 C20orf78Q9BR46 151 aa16.05■□□□□ 0.16
HLA-C-202ENST00000376237 SRIP30626 198 aa16.04■□□□□ 0.16
HLA-C-202ENST00000376237 ST20Q9HBF5 79 aa16.04■□□□□ 0.16
HLA-C-202ENST00000376237 A0A0J9YY99 117 aa16.04■□□□□ 0.16
HLA-C-202ENST00000376237 NPYP01303 97 aa16.04■□□□□ 0.16
HLA-C-202ENST00000376237 GYPEP15421 78 aa16.04■□□□□ 0.16
HLA-C-202ENST00000376237 SUMO2P61956 95 aaKnown RBP16.03■□□□□ 0.16
HLA-C-202ENST00000376237 ZNRF2Q8NHG8 242 aa16.03■□□□□ 0.16
HLA-C-202ENST00000376237 Q9UF83 564 aa16.03■□□□□ 0.16
HLA-C-202ENST00000376237 PRSS47A8MTI9 375 aa16.02■□□□□ 0.15
HLA-C-202ENST00000376237 LOC100131303A0A0U1RQF7 123 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 GAGE12JA6NER3 117 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 C1orf196B1AJZ1 125 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 GAGE1Q13065 139 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 GAGE4Q13068 117 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 GAGE5Q13069 117 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 MRPL23Q16540 153 aaKnown RBP16.01■□□□□ 0.15
HLA-C-202ENST00000376237 GAGE13Q4V321 117 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 MAP1LC3AQ9H492 121 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 ICOSQ9Y6W8 199 aa16.01■□□□□ 0.15
HLA-C-202ENST00000376237 SDHAF1A6NFY7 115 aa16■□□□□ 0.15
HLA-C-202ENST00000376237 RPL32P62910 135 aaKnown RBP16■□□□□ 0.15
HLA-C-202ENST00000376237 SH2D6Q7Z4S9 175 aa16■□□□□ 0.15
HLA-C-202ENST00000376237 NUPR2A6NF83 97 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 POLR2KP53803 58 aaKnown RBP15.99■□□□□ 0.15
HLA-C-202ENST00000376237 UBE2D3P61077 147 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 UBE2D2P62837 147 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 C15orf53Q8NAA6 179 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 WWC2-AS2Q96NR7 200 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 TMEM70Q9BUB7 260 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 LINC00694P0DN24 101 aa15.99■□□□□ 0.15
HLA-C-202ENST00000376237 CEMP1Q6PRD7 247 aaPredicted RBP15.99■□□□□ 0.15
HLA-C-202ENST00000376237 DAZ4Q86SG3 579 aaKnown RBP15.99■□□□□ 0.15
HLA-C-202ENST00000376237 DAZ3Q9NR90 486 aaKnown RBP15.99■□□□□ 0.15
HLA-C-202ENST00000376237 VCYO14598 125 aa15.98■□□□□ 0.15
HLA-C-202ENST00000376237 C18orf32Q8TCD1 76 aa15.98■□□□□ 0.15
HLA-C-202ENST00000376237 TRBV27A0A0K0K1C4 114 aa15.97■□□□□ 0.15
HLA-C-202ENST00000376237 SMIM2Q9BVW6 85 aa15.97■□□□□ 0.15
HLA-C-202ENST00000376237 KLK5Q9Y337 293 aaPredicted RBP15.97■□□□□ 0.15
HLA-C-202ENST00000376237 A0A096LPF7 62 aa15.96■□□□□ 0.15
HLA-C-202ENST00000376237 ATP6V0E2Q8NHE4 81 aa15.96■□□□□ 0.15
HLA-C-202ENST00000376237 NXT2Q9NPJ8 142 aaKnown RBP15.96■□□□□ 0.15
HLA-C-202ENST00000376237 LOC389332A0A1B0GUA5 103 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 IGLL5B9A064 214 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 I3L3M4 83 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BKO60814 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BJP06899 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 PMCHP20382 165 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BOP23527 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BBP33778 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BDP58876 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BCP62807 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST2H2BEQ16778 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.95■□□□□ 0.14
HLA-C-202ENST00000376237 NEGR1Q7Z3B1 354 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BHQ93079 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BNQ99877 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 HIST1H2BMQ99879 126 aa15.95■□□□□ 0.14
HLA-C-202ENST00000376237 RAB5BP61020 215 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 Q0VG73 95 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 PRSS3P2Q8NHM4 247 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 KIR2DL4Q99706 377 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 TCAPO15273 167 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 NUDT3O95989 172 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 Q8N8P6 123 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 MUC7Q8TAX7 377 aa15.94■□□□□ 0.14
HLA-C-202ENST00000376237 TCTAP57738 103 aa15.93■□□□□ 0.14
HLA-C-202ENST00000376237 TMEM97Q5BJF2 176 aa15.93■□□□□ 0.14
HLA-C-202ENST00000376237 IGLV2-18A0A075B6J9 118 aa15.92■□□□□ 0.14
HLA-C-202ENST00000376237 K7EMI3 77 aa15.92■□□□□ 0.14
HLA-C-202ENST00000376237 IQCJQ1A5X6 159 aa15.92■□□□□ 0.14
HLA-C-202ENST00000376237 IFI27P40305 119 aaPredicted RBP15.91■□□□□ 0.14
HLA-C-202ENST00000376237 COTL1Q14019 142 aa15.91■□□□□ 0.14
HLA-C-202ENST00000376237 GTSF1LQ9H1H1 148 aa15.91■□□□□ 0.14
HLA-C-202ENST00000376237 IGHV3-38A0A0C4DH36 116 aa15.9■□□□□ 0.14
HLA-C-202ENST00000376237 BAGE3Q86Y29 109 aa15.9■□□□□ 0.14
HLA-C-202ENST00000376237 TGP01266 2768 aa15.9■□□□□ 0.14
HLA-C-202ENST00000376237 LINC00614P0C842 121 aa15.89■□□□□ 0.13
HLA-C-202ENST00000376237 FCER1GP30273 86 aa15.89■□□□□ 0.13
HLA-C-202ENST00000376237 FA2HQ7L5A8 372 aa15.89■□□□□ 0.13
HLA-C-202ENST00000376237 NIT1Q86X76 327 aa15.89■□□□□ 0.13
HLA-C-202ENST00000376237 TIRAPP58753 221 aa15.88■□□□□ 0.13
HLA-C-202ENST00000376237 LINC01546A6NGU7 62 aa15.87■□□□□ 0.13
HLA-C-202ENST00000376237 TSHBP01222 138 aa15.86■□□□□ 0.13
HLA-C-202ENST00000376237 LYPD5Q6UWN5 251 aa15.86■□□□□ 0.13
HLA-C-202ENST00000376237 CHCHD1Q96BP2 118 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms