RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 ZFP2Q6ZN57 461 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
PDPN-203ENST00000376061 ZNF479Q96JC4 524 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 CELA1Q9UNI1 258 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 DEFB130AP0DP74 79 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 LINC00310P59036 64 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 COA6Q5JTJ3 125 aaKnown RBP7.43□□□□□ -1.22
PDPN-203ENST00000376061 Q6ZSN1 163 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 C18orf15Q96N68 181 aa7.43□□□□□ -1.22
PDPN-203ENST00000376061 C11orf68Q9H3H3 251 aaKnown RBP7.43□□□□□ -1.22
PDPN-203ENST00000376061 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 M0QY20 66 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 S100A6P06703 90 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 BAGE3Q86Y29 109 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 EDA2RQ9HAV5 297 aa7.42□□□□□ -1.22
PDPN-203ENST00000376061 SERF1AO75920 110 aa7.41□□□□□ -1.22
PDPN-203ENST00000376061 GHRHP01286 108 aa7.41□□□□□ -1.22
PDPN-203ENST00000376061 SPART-AS1P0CW21 52 aa7.41□□□□□ -1.22
PDPN-203ENST00000376061 URB1-AS1Q96HZ7 61 aa7.41□□□□□ -1.22
PDPN-203ENST00000376061 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
PDPN-203ENST00000376061 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 TEX48A0A1B0GUV7 120 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 C5orf52A6NGY3 159 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 H7C1H1 209 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 PPP1R17O96001 155 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 P0DMU3 169 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 FAM231AP0DMU4 169 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 FAM231CP0DMU5 169 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 DAD1P61803 113 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 SNRPEP62304 92 aaKnown RBP7.4□□□□□ -1.22
PDPN-203ENST00000376061 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
PDPN-203ENST00000376061 B9D2Q9BPU9 175 aa7.4□□□□□ -1.22
PDPN-203ENST00000376061 COL7A1Q02388 2944 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
PDPN-203ENST00000376061 A0A0J9YWU9 116 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 NUPR1O60356 82 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 CIDEAO60543 219 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
PDPN-203ENST00000376061 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
PDPN-203ENST00000376061 FHL2Q14192 279 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 C20orf78Q9BR46 151 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 SMIM2Q9BVW6 85 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 Q9UF83 564 aa7.39□□□□□ -1.23
PDPN-203ENST00000376061 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 TRGV4A0A0C4DH28 118 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 A4D1N5 150 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 K7EQD1 137 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 ESDP10768 282 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 PMCHP20382 165 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 HOXA5P20719 270 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 DEFA6Q01524 100 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 NIT1Q86X76 327 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 HIST3H2BBQ8N257 126 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
PDPN-203ENST00000376061 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
PDPN-203ENST00000376061 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
PDPN-203ENST00000376061 C12orf74Q32Q52 190 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 FA2HQ7L5A8 372 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 NEGR1Q7Z3B1 354 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 Q8N8P6 123 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
PDPN-203ENST00000376061 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
PDPN-203ENST00000376061 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 SDHAF1A6NFY7 115 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 LINC01546A6NGU7 62 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 ATP5G1P05496 136 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 LINC00614P0C842 121 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
PDPN-203ENST00000376061 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 AP5S1Q9NUS5 200 aa7.36□□□□□ -1.23
PDPN-203ENST00000376061 PRKDCP78527 4128 aaKnown RBP7.36□□□□□ -1.23
PDPN-203ENST00000376061 TRBV27A0A0K0K1C4 114 aa7.35□□□□□ -1.23
PDPN-203ENST00000376061 HSBP1O75506 76 aa7.35□□□□□ -1.23
PDPN-203ENST00000376061 RHOHQ15669 191 aa7.35□□□□□ -1.23
PDPN-203ENST00000376061 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
PDPN-203ENST00000376061 STAB2Q8WWQ8 2551 aa7.35□□□□□ -1.23
PDPN-203ENST00000376061 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 TCAPO15273 167 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 HTN3P15516 51 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 CRYBA4P53673 196 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms