RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 H7C2G1 150 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 PMVKQ15126 192 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 MDFICQ9P1T7 246 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 J3QLI3 93 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 A6NJY4 79 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
MSH5-203ENST00000375750 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 UBE2D3P61077 147 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 UBE2D2P62837 147 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
MSH5-203ENST00000375750 IGHG2P01859 326 aa11.27□□□□□ -0.61
MSH5-203ENST00000375750 SCGB1A1P11684 91 aa11.27□□□□□ -0.61
MSH5-203ENST00000375750 CKS1BP61024 79 aa11.27□□□□□ -0.61
MSH5-203ENST00000375750 AMELXQ99217 191 aa11.27□□□□□ -0.61
MSH5-203ENST00000375750 CUBNO60494 3623 aa11.27□□□□□ -0.61
MSH5-203ENST00000375750 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
MSH5-203ENST00000375750 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
MSH5-203ENST00000375750 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
MSH5-203ENST00000375750 XGP55808 180 aa11.26□□□□□ -0.61
MSH5-203ENST00000375750 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
MSH5-203ENST00000375750 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
MSH5-203ENST00000375750 CCDC168Q8NDH2 2452 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 KLLNB2CW77 178 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 VCYO14598 125 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 HERVK_113P61574 105 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 A0A087WW49 117 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 NXPH4O95158 308 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 ZNF56Q15929 161 aa11.25□□□□□ -0.61
MSH5-203ENST00000375750 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
MSH5-203ENST00000375750 J3QQQ9 107 aa11.24□□□□□ -0.61
MSH5-203ENST00000375750 SPINK8P0C7L1 97 aa11.24□□□□□ -0.61
MSH5-203ENST00000375750 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
MSH5-203ENST00000375750 A4D1N5 150 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 A0A1B0GV72 72 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 FSHBP01225 129 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 PRM2P04554 102 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 P0DMU3 169 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 DCANP1Q8TF63 244 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
MSH5-203ENST00000375750 PDZD2O15018 2839 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 ITPR3Q14573 2671 aa11.23□□□□□ -0.61
MSH5-203ENST00000375750 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 PPP1R17O96001 155 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 ELANEP08246 267 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
MSH5-203ENST00000375750 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 Q8N1Y9 231 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 AKAP9Q99996 3911 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 HTN1P15515 57 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
MSH5-203ENST00000375750 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
MSH5-203ENST00000375750 Q6ZUT4 128 aa11.21□□□□□ -0.61
MSH5-203ENST00000375750 DUX5Q96PT3 197 aa11.21□□□□□ -0.61
MSH5-203ENST00000375750 PRO1854Q9UHT4 67 aa11.21□□□□□ -0.61
MSH5-203ENST00000375750 IGHV3-16A0A0C4DH30 117 aa11.21□□□□□ -0.62
MSH5-203ENST00000375750 M0QY20 66 aa11.21□□□□□ -0.62
MSH5-203ENST00000375750 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.62
MSH5-203ENST00000375750 TMEM141Q96I45 108 aa11.21□□□□□ -0.62
MSH5-203ENST00000375750 USMG5Q96IX5 58 aa11.21□□□□□ -0.62
MSH5-203ENST00000375750 TIMM17AQ99595 171 aa11.21□□□□□ -0.62
MSH5-203ENST00000375750 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 PROK1P58294 105 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 Q6YL49 198 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 Q9UF83 564 aa11.2□□□□□ -0.62
MSH5-203ENST00000375750 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
MSH5-203ENST00000375750 LGALS9O00182 355 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 CRYBA4P53673 196 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 ATP6V0E2Q8NHE4 81 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 PPDPFLQ8WWR9 84 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 A8MWV9 139 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 C9JAW5 83 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
MSH5-203ENST00000375750 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
MSH5-203ENST00000375750 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
MSH5-203ENST00000375750 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms