RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
C9orf3-203ENST00000375315 J3QKU1 62 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.93
C9orf3-203ENST00000375315 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.93
C9orf3-203ENST00000375315 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.93
C9orf3-203ENST00000375315 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-203ENST00000375315 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
C9orf3-203ENST00000375315 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
C9orf3-203ENST00000375315 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
C9orf3-203ENST00000375315 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 PF4V1P10720 104 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 IMUPQ9GZP8 106 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 WIPF1O43516 503 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV3-23P01764 117 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 A0A1B0GX51 115 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 H3BT86 120 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 M0R1W7 72 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 UQCRQO14949 82 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
C9orf3-203ENST00000375315 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 SIRPDQ9H106 197 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV3-35A0A0C4DH35 117 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 AVPP01185 164 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 HERVK_113P63121 156 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 PMVKQ15126 192 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 BEX4Q9NWD9 120 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV4-4A0A075B6R2 117 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-203ENST00000375315 DUX5Q96PT3 197 aa9.19□□□□□ -0.94
C9orf3-203ENST00000375315 MXRA5Q9NR99 2828 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 TMEM170BQ5T4T1 132 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV3OR16-8A0A075B7F1 116 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 TRBV30A0A0K0K1B3 111 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 J3QQQ9 107 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 EBI3Q14213 229 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 ECSCRQ19T08 205 aa9.18□□□□□ -0.94
C9orf3-203ENST00000375315 ZNF469Q96JG9 3925 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-203ENST00000375315 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 NBR2O15453 112 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 ELANEP08246 267 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 Q96MF0 132 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 MSMBP08118 114 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 MFAP4P55083 255 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
C9orf3-203ENST00000375315 CRYGDP07320 174 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 DUX3Q96PT4 197 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 C11orf21Q9P2W6 132 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 NF1P21359 2839 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 RBAKDNA6NC62 111 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 COX6CP09669 75 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-203ENST00000375315 ATP5G1P05496 136 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 POM121L12Q8N7R1 296 aa9.16□□□□□ -0.94
C9orf3-203ENST00000375315 ODF3BA8MYP8 253 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 H7C423 109 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 TRIAP1O43715 76 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 UBE2E1P51965 193 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 NDPQ00604 133 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
C9orf3-203ENST00000375315 ZNF256Q9Y2P7 627 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-203ENST00000375315 PPP1R17O96001 155 aa9.15□□□□□ -0.95
C9orf3-203ENST00000375315 ACYP1P07311 99 aa9.15□□□□□ -0.95
C9orf3-203ENST00000375315 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.95
C9orf3-203ENST00000375315 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
C9orf3-203ENST00000375315 C14orf178Q8N769 122 aaPredicted RBP9.14□□□□□ -0.95
C9orf3-203ENST00000375315 WFDC11Q8NEX6 87 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 RPL39LQ96EH5 51 aaKnown RBP9.14□□□□□ -0.95
C9orf3-203ENST00000375315 AMELXQ99217 191 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 G3V318 75 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 METTL26Q96S19 204 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 JMJD1CQ15652 2540 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 CUBNO60494 3623 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 H3BUX3 64 aa9.14□□□□□ -0.95
C9orf3-203ENST00000375315 B4DSR2 109 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 M0R381 172 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 DEFB113Q30KQ7 82 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 WNK1Q9H4A3 2382 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
C9orf3-203ENST00000375315 IGHV1-69P01742 117 aa9.12□□□□□ -0.95
C9orf3-203ENST00000375315 MGPP08493 103 aa9.12□□□□□ -0.95
C9orf3-203ENST00000375315 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
C9orf3-203ENST00000375315 RNF5Q99942 180 aa9.12□□□□□ -0.95
C9orf3-203ENST00000375315 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
C9orf3-203ENST00000375315 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms