RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 DNAH6Q9C0G6 4158 aa7.76□□□□□ -1.17
HLA-DQA1-202ENST00000374949 ABCA13Q86UQ4 5058 aa7.76□□□□□ -1.17
HLA-DQA1-202ENST00000374949 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 EMP1P54849 157 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 ZNF56Q15929 161 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 IQCJQ1A5X6 159 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 ZFP2Q6ZN57 461 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 Q6ZTI0 123 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 NIT1Q86X76 327 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 OR4C5Q8NGB2 326 aa7.75□□□□□ -1.17
HLA-DQA1-202ENST00000374949 TRAV4A0A0B4J268 109 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 IGHV4-28A0A0C4DH34 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAGE12BA1L429 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 RHODO00212 210 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 CIDEAO60543 219 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAGE7O76087 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 NPYP01303 97 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAGE12FP0CL80 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAGE12GP0CL81 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GAGE12IP0CL82 117 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 GATA1P15976 413 aaPredicted RBP7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 UFSP1Q6NVU6 142 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 PRSS3P2Q8NHM4 247 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
HLA-DQA1-202ENST00000374949 TRGV2A0A075B6R0 118 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 IGHV3-73A0A0B4J1V6 119 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 LOC389332A0A1B0GUA5 103 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 LYRM9A8MSI8 78 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 PRSS47A8MTI9 375 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 IGLL5B9A064 214 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 H7C1H1 209 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 SERF1AO75920 110 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 LINC00614P0C842 121 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 NRACQ8N912 160 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 APLNQ9ULZ1 77 aa7.73□□□□□ -1.17
HLA-DQA1-202ENST00000374949 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 M0QY20 66 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 NUPR1O60356 82 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 ESDP10768 282 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 S100A2P29034 98 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 IFI27P40305 119 aaPredicted RBP7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 FA2HQ7L5A8 372 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 LINC00612Q8N6U2 182 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 Q8NAQ8 132 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 CHCHD1Q96BP2 118 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 C20orf78Q9BR46 151 aa7.72□□□□□ -1.17
HLA-DQA1-202ENST00000374949 LOC105371267A0A1B0GV96 52 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 A0A1B0GVY2 172 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 IGHV3-53P01767 116 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DEFB130BP0DP73 79 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DEFB130AP0DP74 79 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TCTAP57738 103 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 LINC00310P59036 64 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 ZNF479Q96JC4 524 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 ST20Q9HBF5 79 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 NXT2Q9NPJ8 142 aaKnown RBP7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 HSBP1O75506 76 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 SPART-AS1P0CW21 52 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 PMCHP20382 165 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 PDZD11Q5EBL8 140 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FAM222AQ5U5X8 452 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 Q6ZSN1 163 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 Q8N8P6 123 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 C18orf15Q96N68 181 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DKK2Q9UBU2 259 aa7.7□□□□□ -1.18
HLA-DQA1-202ENST00000374949 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 VCYO14598 125 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 Q6ZTC4 211 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 LINC00336Q6ZUF6 198 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TMEM18Q96B42 140 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DNAJC30Q96LL9 226 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TNFRSF18Q9Y5U5 241 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
HLA-DQA1-202ENST00000374949 IGLV2-18A0A075B6J9 118 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TRGV4A0A0C4DH28 118 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TEX48A0A1B0GUV7 120 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 POLR2KP53803 58 aaKnown RBP7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DAD1P61803 113 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 PACRGQ96M98 296 aaPredicted RBP7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 SMIM2Q9BVW6 85 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 IFITM10A6NMD0 228 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FABP4P15090 132 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FHL2Q14192 279 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FAM19A2Q8N3H0 131 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 HIST1H2BLQ99880 126 aa7.67□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DNAH11Q96DT5 4516 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms