RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 HOXA5P20719 270 aa12.14□□□□□ -0.47
HLA-DMA-201ENST00000374843 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 MAP1LC3AQ9H492 121 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
HLA-DMA-201ENST00000374843 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 RHOHQ15669 191 aa12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 C11orf45Q8TAV5 145 aa12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 TMA7Q9Y2S6 64 aaKnown RBP12.12□□□□□ -0.47
HLA-DMA-201ENST00000374843 P0DMU3 169 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 LINC00694P0DN24 101 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 CRYBA4P53673 196 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
HLA-DMA-201ENST00000374843 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 IGLV2-18A0A075B6J9 118 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 LINC00310P59036 64 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 Q6ZTC4 211 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 TMEM70Q9BUB7 260 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
HLA-DMA-201ENST00000374843 LINC01546A6NGU7 62 aa12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 PMCHP20382 165 aa12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 NANOS2P60321 138 aaKnown RBP12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 URB1-AS1Q96HZ7 61 aa12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 PRADC1Q9BSG0 188 aa12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 Q9UF83 564 aa12.09□□□□□ -0.47
HLA-DMA-201ENST00000374843 TRBV27A0A0K0K1C4 114 aa12.08□□□□□ -0.48
HLA-DMA-201ENST00000374843 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
HLA-DMA-201ENST00000374843 ESDP10768 282 aa12.08□□□□□ -0.48
HLA-DMA-201ENST00000374843 BAGE3Q86Y29 109 aa12.08□□□□□ -0.48
HLA-DMA-201ENST00000374843 Q8N8P6 123 aa12.08□□□□□ -0.48
HLA-DMA-201ENST00000374843 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 SERF1AO75920 110 aa12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 NDUFA6P56556 154 aa12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 RPL36AP83881 106 aaKnown RBP12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 RPL36ALQ969Q0 106 aaKnown RBP12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
HLA-DMA-201ENST00000374843 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 F5H768 121 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 K7EMI3 77 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 UBE2D3P61077 147 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 UBE2D2P62837 147 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
HLA-DMA-201ENST00000374843 LOC100131303A0A0U1RQF7 123 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 H3BNG1 76 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 VCYO14598 125 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 S100A6P06703 90 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 NIT1Q86X76 327 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
HLA-DMA-201ENST00000374843 TRAV10A0A0B4J240 114 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 C5orf52A6NGY3 159 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 PAX4O43316 350 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 LINC00614P0C842 121 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 HTN3P15516 51 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 RNASEKQ6P5S7 137 aaKnown RBP12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
HLA-DMA-201ENST00000374843 DYNC2H1Q8NCM8 4307 aaKnown RBP12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 I3L3M4 83 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 TCAPO15273 167 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GYPEP15421 78 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GAGE1Q13065 139 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GAGE4Q13068 117 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GAGE5Q13069 117 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
HLA-DMA-201ENST00000374843 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.49
HLA-DMA-201ENST00000374843 DEFB131BA0A096LNP1 70 aa12.02□□□□□ -0.49
HLA-DMA-201ENST00000374843 NUPR1O60356 82 aa12.02□□□□□ -0.49
HLA-DMA-201ENST00000374843 TSHBP01222 138 aa12.02□□□□□ -0.49
HLA-DMA-201ENST00000374843 KIR2DL4Q99706 377 aa12.02□□□□□ -0.49
HLA-DMA-201ENST00000374843 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
HLA-DMA-201ENST00000374843 HSBP1O75506 76 aa12□□□□□ -0.49
HLA-DMA-201ENST00000374843 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
HLA-DMA-201ENST00000374843 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 A0A0J9YY99 117 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 LAGE3Q14657 143 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 ICOSQ9Y6W8 199 aa11.99□□□□□ -0.49
HLA-DMA-201ENST00000374843 A0A096LNJ9 63 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms