RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PRR27Q6MZM9 219 aa5.64□□□□□ -1.51
HLA-DOA-202ENST00000374813 C5orf17Q8NAS9 161 aa5.64□□□□□ -1.51
HLA-DOA-202ENST00000374813 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
HLA-DOA-202ENST00000374813 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 H0Y9J4 135 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 HMGB3O15347 200 aaKnown RBP5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 NOL3O60936 208 aaKnown RBP5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 IL7P13232 177 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 SULT1A2P50226 295 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 ZNF56Q15929 161 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 AQP10Q96PS8 301 aa5.63□□□□□ -1.51
HLA-DOA-202ENST00000374813 A0A1W2PPV4 95 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 KRBOX1C9JBD0 128 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 SIX6O95475 246 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 CNPY1Q3B7I2 92 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 NUDT15Q9NV35 164 aa5.62□□□□□ -1.51
HLA-DOA-202ENST00000374813 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 CENPXA8MT69 81 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 F5H697 171 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 LRRC37A5PQ49AS3 106 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 EPDR1Q9UM22 224 aa5.61□□□□□ -1.51
HLA-DOA-202ENST00000374813 GRIFINA4D1Z8 144 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 A6NHS1 94 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 LYRM1O43325 122 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 TSPAN13O95857 204 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 AMTP48728 403 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 EIF5AP63241 154 aaKnown RBP5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 ZNF674Q2M3X9 581 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 CARD19Q96LW7 228 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 TMEM243Q9BU79 118 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 SMIM3Q9BZL3 60 aa5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 CARHSP1Q9Y2V2 147 aaKnown RBP5.6□□□□□ -1.51
HLA-DOA-202ENST00000374813 M0R036 132 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 UBE2L6O14933 153 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 SUMO1P63165 101 aaKnown RBP5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 CYCSP99999 105 aaKnown RBP5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 GAGE2BQ13066 116 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 TSKUQ8WUA8 353 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 RBM38Q9H0Z9 239 aaKnown RBP5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 WFDC1Q9HC57 220 aa5.59□□□□□ -1.51
HLA-DOA-202ENST00000374813 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 CCDC160A6NGH7 325 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 H2AFB2P0C5Z0 115 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 ARL14EPLP0DKL9 152 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 FGF6P10767 208 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 FAM162BQ5T6X4 162 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 SCGB1C1Q8TD33 95 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 CHCHD10Q8WYQ3 142 aaPredicted RBP5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 ARL2-SNX15V9GYD0 113 aa5.58□□□□□ -1.52
HLA-DOA-202ENST00000374813 A0A087WZ39 114 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 ZNF561-AS1K7EIQ3 104 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 SMIM17P0DL12 118 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 CRIP1P50238 77 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 SYCNQ0VAF6 134 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 ZNF471Q9BX82 626 aaPredicted RBP5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 HSPB11Q9Y547 144 aa5.57□□□□□ -1.52
HLA-DOA-202ENST00000374813 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 RPL12P30050 165 aaKnown RBP5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 MED28Q9H204 178 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 ZFP30Q9Y2G7 519 aa5.56□□□□□ -1.52
HLA-DOA-202ENST00000374813 TMSB15BA0A087X1C1 80 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 SH2D1AO60880 128 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 STAG3L2P0CL84 134 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 STAG3L3P0CL85 134 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 CRYGAP11844 174 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 GCHFRP30047 84 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 H2BFSP57053 126 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 COX8CQ7Z4L0 72 aa5.55□□□□□ -1.52
HLA-DOA-202ENST00000374813 FOXI1Q12951 378 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 SPANXN1Q5VSR9 72 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 PPP1R1CQ8WVI7 109 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 TMEM167BQ9NRX6 74 aa5.54□□□□□ -1.52
HLA-DOA-202ENST00000374813 CDC34P49427 236 aaPredicted RBP5.53□□□□□ -1.52
HLA-DOA-202ENST00000374813 Q86TA4 180 aa5.53□□□□□ -1.52
HLA-DOA-202ENST00000374813 RAB24Q969Q5 203 aa5.53□□□□□ -1.52
HLA-DOA-202ENST00000374813 FAM240BA0A1B0GVZ2 78 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 A0A1W2PRE2 83 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 M0QY20 66 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 APOMO95445 188 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 MPC2O95563 127 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 CAMPP49913 170 aa5.52□□□□□ -1.53
HLA-DOA-202ENST00000374813 DEFA3P59666 94 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms