RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 C17orf82Q86X59 251 aaPredicted RBP6.56□□□□□ -1.36
HSPG2-203ENST00000374695 C10orf105Q8TEF2 133 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 BPY2O14599 106 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 RNF138Q8WVD3 245 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 Q6ZQT7 251 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 IGHV4-4A0A075B6R2 117 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 COX7BP24311 80 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 TMEM105Q8N8V8 129 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 E9PLD3 99 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 LINC00205P59089 165 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 FAM120AOSQ5T036 256 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 PRB1P04280 392 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 VWCEQ96DN2 955 aa6.55□□□□□ -1.36
HSPG2-203ENST00000374695 CENPVL3A0A0U1RRI6 287 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 FGF23Q9GZV9 251 aaPredicted RBP6.54□□□□□ -1.36
HSPG2-203ENST00000374695 PRR20EP86478 221 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 PRR20CP86479 221 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 PRR20DP86480 221 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 PRR20BP86481 221 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 PRR20AP86496 221 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 CTRLP40313 264 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 LTBP2Q14767 1821 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
HSPG2-203ENST00000374695 RNF183Q96D59 192 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 NPBQ8NG41 125 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 LECT2O14960 151 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 ZNF491Q8N8L2 437 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 Q9HAA7 133 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 C5orf38Q86SI9 138 aa6.54□□□□□ -1.36
HSPG2-203ENST00000374695 TRBV6-1A0A0K0K1D8 114 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 CCL24O00175 119 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 MIAQ16674 131 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 RPL39LQ96EH5 51 aaKnown RBP6.53□□□□□ -1.36
HSPG2-203ENST00000374695 Q96MF0 132 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 LOXP28300 417 aaPredicted RBP6.53□□□□□ -1.36
HSPG2-203ENST00000374695 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 GP9P14770 177 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 C5orf24Q7Z6I8 188 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 ZNF581Q9P0T4 197 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 IGLV1-44P01699 117 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 IGFL3Q6UXB1 125 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 Q8NFD4 153 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 A0A096LPF7 62 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 P0DMU3 169 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 FAM231AP0DMU4 169 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 FAM231CP0DMU5 169 aa6.53□□□□□ -1.36
HSPG2-203ENST00000374695 GNRH2O43555 120 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
HSPG2-203ENST00000374695 UNQ6494/PRO21346Q6UXR6 183 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 A0A0J9YY99 117 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 C16orf54Q6UWD8 224 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 WDR86Q86TI4 376 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 FXYD2P54710 66 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 A0A0C4DFX4 3053 aa6.52□□□□□ -1.37
HSPG2-203ENST00000374695 LY6HO94772 140 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 WI2-2373I1.2A0A1W2PRP0 233 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 VPREB1P12018 145 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 ZNRD1Q9P1U0 126 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 IGLV3-9A0A075B6K5 115 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 PRB2P02812 416 aaPredicted RBP6.51□□□□□ -1.37
HSPG2-203ENST00000374695 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 IGF2RP11717 2491 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 NCR3O14931 201 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 K7ENP7 123 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 UFSP1Q6NVU6 142 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
HSPG2-203ENST00000374695 TEX22C9J3V5 150 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 KLK5Q9Y337 293 aaPredicted RBP6.5□□□□□ -1.37
HSPG2-203ENST00000374695 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 H7C423 109 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 CDPF1Q6NVV7 123 aa6.5□□□□□ -1.37
HSPG2-203ENST00000374695 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 CLEC2BQ92478 149 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 C1orf147Q96MC9 270 aaPredicted RBP6.49□□□□□ -1.37
HSPG2-203ENST00000374695 USP9YO00507 2555 aaPredicted RBP6.49□□□□□ -1.37
HSPG2-203ENST00000374695 HIST2H2BDQ6DRA6 164 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 ODF1Q14990 250 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 TRBV10-1A0A0K0K1A3 114 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 M0QXV9 152 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 RNF144BQ7Z419 303 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 IGLV3-1P01715 115 aa6.49□□□□□ -1.37
HSPG2-203ENST00000374695 IGLV10-54A0A075B6I4 117 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 SP5Q6BEB4 398 aaPredicted RBP6.48□□□□□ -1.37
HSPG2-203ENST00000374695 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
HSPG2-203ENST00000374695 YPEL4Q96NS1 127 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 K7EMT4 169 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 A6NED7 52 aa6.48□□□□□ -1.37
HSPG2-203ENST00000374695 C17orf77Q96MU5 243 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms