RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 MYOZ3Q8TDC0 251 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
RXRB-202ENST00000374685 LINC01619G3V211 115 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 RASL10AQ92737 203 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 SETXQ7Z333 2677 aaKnown RBP13.58□□□□□ -0.24
RXRB-202ENST00000374685 FN1P02751 2386 aaKnown RBP13.58□□□□□ -0.24
RXRB-202ENST00000374685 FOXI1Q12951 378 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 LAGE3Q14657 143 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 Q8N1Y9 231 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 SYT8Q8NBV8 401 aa13.58□□□□□ -0.24
RXRB-202ENST00000374685 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
RXRB-202ENST00000374685 IGLV2-18A0A075B6J9 118 aa13.57□□□□□ -0.24
RXRB-202ENST00000374685 IGKV2D-26A0A0A0MRZ7 120 aa13.57□□□□□ -0.24
RXRB-202ENST00000374685 APOMO95445 188 aa13.57□□□□□ -0.24
RXRB-202ENST00000374685 MT-ATP8P03928 68 aa13.57□□□□□ -0.24
RXRB-202ENST00000374685 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 SUMO2P61956 95 aaKnown RBP13.56□□□□□ -0.24
RXRB-202ENST00000374685 GAGE5Q13069 117 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 GAGE6Q13070 117 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 Q6ZUT4 128 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 SMR3AQ99954 134 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 TTTY13Q9BZ97 58 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 LGALS9O00182 355 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 SHISA2Q6UWI4 295 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 C1QTNF4Q9BXJ3 329 aa13.56□□□□□ -0.24
RXRB-202ENST00000374685 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 AMTNQ6UX39 209 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 ZMAT4Q9H898 229 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 NACAE9PAV3 2078 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 C2CD3Q4AC94 2353 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 TAL2Q16559 108 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 C12orf74Q32Q52 190 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
RXRB-202ENST00000374685 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 HHLA3Q9XRX5 114 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 RRN3P1Q2M238 152 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 FAM110AQ9BQ89 295 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
RXRB-202ENST00000374685 CD28P10747 220 aa13.53□□□□□ -0.24
RXRB-202ENST00000374685 XGP55808 180 aa13.53□□□□□ -0.24
RXRB-202ENST00000374685 ZNF56Q15929 161 aa13.53□□□□□ -0.24
RXRB-202ENST00000374685 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
RXRB-202ENST00000374685 GTSCR1Q86UQ5 136 aa13.52□□□□□ -0.24
RXRB-202ENST00000374685 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.24
RXRB-202ENST00000374685 ODF1Q14990 250 aa13.52□□□□□ -0.25
RXRB-202ENST00000374685 Q8N2B8 174 aa13.52□□□□□ -0.25
RXRB-202ENST00000374685 ANAPC13Q9BS18 74 aa13.52□□□□□ -0.25
RXRB-202ENST00000374685 PEMTQ9UBM1 199 aa13.52□□□□□ -0.25
RXRB-202ENST00000374685 IGHV1OR15-1A0A075B7D0 117 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 FHL3Q13643 280 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1FQ15415 496 aaKnown RBP13.51□□□□□ -0.25
RXRB-202ENST00000374685 MRPL35Q9NZE8 188 aaKnown RBP13.51□□□□□ -0.25
RXRB-202ENST00000374685 ZNF256Q9Y2P7 627 aaPredicted RBP13.51□□□□□ -0.25
RXRB-202ENST00000374685 IGHV3-16A0A0C4DH30 117 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 TRBV7-9A0A0J9YWB2 115 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
RXRB-202ENST00000374685 ZNF876PQ49A33 203 aa13.5□□□□□ -0.25
RXRB-202ENST00000374685 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
RXRB-202ENST00000374685 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
RXRB-202ENST00000374685 DUSP14O95147 198 aaKnown RBP13.49□□□□□ -0.25
RXRB-202ENST00000374685 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
RXRB-202ENST00000374685 RAX2Q96IS3 184 aa13.49□□□□□ -0.25
RXRB-202ENST00000374685 SCGB3A1Q96QR1 104 aa13.49□□□□□ -0.25
RXRB-202ENST00000374685 K7EMI3 77 aa13.49□□□□□ -0.25
RXRB-202ENST00000374685 ANK3Q12955 4377 aaKnown RBP13.48□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
RXRB-202ENST00000374685 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
RXRB-202ENST00000374685 SMCPP49901 116 aaPredicted RBP13.48□□□□□ -0.25
RXRB-202ENST00000374685 ZC2HC1BQ5TFG8 222 aa13.48□□□□□ -0.25
RXRB-202ENST00000374685 NFE4Q86UQ8 179 aa13.48□□□□□ -0.25
RXRB-202ENST00000374685 IGKCP01834 107 aa13.48□□□□□ -0.25
RXRB-202ENST00000374685 LINC00315P59091 139 aa13.48□□□□□ -0.25
RXRB-202ENST00000374685 KRTAP1-1Q07627 177 aa13.48□□□□□ -0.25
RXRB-202ENST00000374685 ATP5LO75964 103 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 EMP1P54849 157 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 C2orf66Q6UXQ4 117 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 VCX2Q9H322 139 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 KIF25-AS1Q9Y6Z4 181 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 HERV-K104P63124 156 aa13.47□□□□□ -0.25
RXRB-202ENST00000374685 B5MCH6 92 aa13.46□□□□□ -0.25
RXRB-202ENST00000374685 H3BMM0 161 aa13.46□□□□□ -0.25
RXRB-202ENST00000374685 LINC01546A6NGU7 62 aa13.46□□□□□ -0.25
RXRB-202ENST00000374685 DEFB114Q30KQ6 69 aa13.46□□□□□ -0.25
RXRB-202ENST00000374685 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
RXRB-202ENST00000374685 CCL24O00175 119 aa13.45□□□□□ -0.26
RXRB-202ENST00000374685 DPM2O94777 84 aa13.45□□□□□ -0.26
RXRB-202ENST00000374685 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
RXRB-202ENST00000374685 OTOGQ6ZRI0 2925 aa13.45□□□□□ -0.26
RXRB-202ENST00000374685 ORMDL2Q53FV1 153 aa13.45□□□□□ -0.26
RXRB-202ENST00000374685 XCL2Q9UBD3 114 aa13.45□□□□□ -0.26
RXRB-202ENST00000374685 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms