RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HSD52Q0P140 79 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 ERASQ7Z444 233 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 CYSLTR1Q9Y271 337 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 SORL1Q92673 2214 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 VAMP3Q15836 100 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 DEFB104AQ8WTQ1 72 aa8.9□□□□□ -0.98
HMGCL-202ENST00000374487 AGRNO00468 2067 aa8.9□□□□□ -0.99
HMGCL-202ENST00000374487 A0A1W2PRX2 142 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 CRYGDP07320 174 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
HMGCL-202ENST00000374487 PROK1P58294 105 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 ZNF124Q15973 351 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 DEFB114Q30KQ6 69 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 TTTY13Q9BZ97 58 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 A6NDN8 102 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 LINC01549A6NIU2 74 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 UBE2V1Q13404 147 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 ZFP2Q6ZN57 461 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 C16orf95Q9H693 158 aa8.89□□□□□ -0.99
HMGCL-202ENST00000374487 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 CD300EQ496F6 205 aaPredicted RBP8.88□□□□□ -0.99
HMGCL-202ENST00000374487 MAP6D1Q9H9H5 199 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 TP53TG1Q9Y2A0 90 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 ZNF256Q9Y2P7 627 aaPredicted RBP8.88□□□□□ -0.99
HMGCL-202ENST00000374487 M0QY20 66 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1A1P0DJD3 496 aaKnown RBP8.88□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1CP0DJD4 496 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1FQ15415 496 aaKnown RBP8.88□□□□□ -0.99
HMGCL-202ENST00000374487 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
HMGCL-202ENST00000374487 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
HMGCL-202ENST00000374487 TRBV6-5A0A0K0K1A5 114 aa8.87□□□□□ -0.99
HMGCL-202ENST00000374487 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
HMGCL-202ENST00000374487 PRSS29PA6NIE9 313 aa8.87□□□□□ -0.99
HMGCL-202ENST00000374487 CCL25O15444 150 aa8.87□□□□□ -0.99
HMGCL-202ENST00000374487 CCL24O00175 119 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 SPAG8Q99932 426 aaPredicted RBP8.86□□□□□ -0.99
HMGCL-202ENST00000374487 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1BA6NDE4 496 aaKnown RBP8.86□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1EA6NEQ0 496 aaKnown RBP8.86□□□□□ -0.99
HMGCL-202ENST00000374487 A8MTW9 85 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 RBMY1DP0C7P1 496 aaKnown RBP8.86□□□□□ -0.99
HMGCL-202ENST00000374487 CD28P10747 220 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
HMGCL-202ENST00000374487 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
HMGCL-202ENST00000374487 LINC01587Q99440 93 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 CITED1Q99966 193 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 OR11H12B2RN74 326 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 GCSHP23434 173 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 OR4C5Q8NGB2 326 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 OR11H2Q8NH07 326 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
HMGCL-202ENST00000374487 CMYA5Q8N3K9 4069 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 IGHV3-73A0A0B4J1V6 119 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 IGIPA6NJ69 53 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 PRM2P04554 102 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -0.99
HMGCL-202ENST00000374487 SHISA2Q6UWI4 295 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 CITED2Q99967 270 aaPredicted RBP8.84□□□□□ -0.99
HMGCL-202ENST00000374487 VWFP04275 2813 aa8.84□□□□□ -0.99
HMGCL-202ENST00000374487 TRAV25A0A0B4J276 109 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 H3BRM9 83 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 M0R2P5 195 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 PMVKQ15126 192 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 MAPKAPK5-AS1Q8N8E1 139 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 TSSC4Q9Y5U2 329 aaPredicted RBP8.83□□□□□ -1
HMGCL-202ENST00000374487 PKD1L1Q8TDX9 2849 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 I3L3M4 83 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 TSHBP01222 138 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 INSP01308 110 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 FHL3Q13643 280 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 STHQ8IWL8 128 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 TIMM17AQ99595 171 aa8.83□□□□□ -1
HMGCL-202ENST00000374487 A8MWV9 139 aa8.82□□□□□ -1
HMGCL-202ENST00000374487 RHOHQ15669 191 aa8.82□□□□□ -1
HMGCL-202ENST00000374487 PAPPA-AS1Q5QFB9 102 aa8.82□□□□□ -1
HMGCL-202ENST00000374487 RAB37Q96AX2 223 aa8.82□□□□□ -1
HMGCL-202ENST00000374487 CST9LQ9H4G1 147 aa8.82□□□□□ -1
HMGCL-202ENST00000374487 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 SMIM13P0DJ93 91 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 EMP1P54849 157 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 NSUN5P1Q3KNT7 163 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 XCL2Q9UBD3 114 aa8.81□□□□□ -1
HMGCL-202ENST00000374487 C9orf118A6NHY6 69 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 E9PLD3 99 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 TNFRSF18Q9Y5U5 241 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 H3BUT2 72 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 FXYD2P54710 66 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 CEND1Q8N111 149 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 HIST1H4GQ99525 98 aa8.8□□□□□ -1
HMGCL-202ENST00000374487 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
HMGCL-202ENST00000374487 C11orf86A6NJI1 115 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms