RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 AZU1P20160 251 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 NUTF2P61970 127 aaKnown RBP14.23□□□□□ -0.13
HDAC1-201ENST00000373548 UFSP1Q6NVU6 142 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 KIR2DL4Q99706 377 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 HHLA3Q9XRX5 114 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 JMJD1CQ15652 2540 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 A0A087WX48 190 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 IGHV3-73A0A0B4J1V6 119 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 IGKCP01834 107 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 TCTAP57738 103 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 SPXQ9BT56 116 aa14.22□□□□□ -0.13
HDAC1-201ENST00000373548 MRPL35Q9NZE8 188 aaKnown RBP14.22□□□□□ -0.13
HDAC1-201ENST00000373548 IGHV3OR16-12A0A075B7B8 117 aa14.21□□□□□ -0.13
HDAC1-201ENST00000373548 CRLF1O75462 422 aa14.21□□□□□ -0.13
HDAC1-201ENST00000373548 DPM2O94777 84 aa14.21□□□□□ -0.13
HDAC1-201ENST00000373548 FGF6P10767 208 aa14.21□□□□□ -0.13
HDAC1-201ENST00000373548 EDA2RQ9HAV5 297 aa14.21□□□□□ -0.13
HDAC1-201ENST00000373548 TRAV12-1A0A0B4J245 112 aa14.2□□□□□ -0.14
HDAC1-201ENST00000373548 GIG44P09565 113 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-201ENST00000373548 ERASQ7Z444 233 aa14.2□□□□□ -0.14
HDAC1-201ENST00000373548 MRPL16Q9NX20 251 aaKnown RBP14.2□□□□□ -0.14
HDAC1-201ENST00000373548 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
HDAC1-201ENST00000373548 HINT1P49773 126 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-201ENST00000373548 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
HDAC1-201ENST00000373548 NEXN-AS1Q8NBZ9 246 aa14.2□□□□□ -0.14
HDAC1-201ENST00000373548 TP53TG1Q9Y2A0 90 aa14.19□□□□□ -0.14
HDAC1-201ENST00000373548 F8P00451 2351 aa14.19□□□□□ -0.14
HDAC1-201ENST00000373548 H7C1H1 209 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 G0S2P27469 103 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 RIPPLY3P57055 190 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 LURAP1LQ8IV03 231 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 BAALCQ8WXS3 180 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 C2orf91Q6ZV80 131 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 IL17DQ8TAD2 202 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 MAST4O15021 2626 aa14.18□□□□□ -0.14
HDAC1-201ENST00000373548 P0DMU3 169 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 FAM231AP0DMU4 169 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 FAM231CP0DMU5 169 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 RPL39P62891 51 aaKnown RBP14.17□□□□□ -0.14
HDAC1-201ENST00000373548 TEP1Q99973 2627 aaKnown RBP14.17□□□□□ -0.14
HDAC1-201ENST00000373548 F8VRH5 84 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 TSHBP01222 138 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 RPL35AP18077 110 aaKnown RBP14.17□□□□□ -0.14
HDAC1-201ENST00000373548 Q6ZSN1 163 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 BOD1L2Q8IYS8 172 aa14.17□□□□□ -0.14
HDAC1-201ENST00000373548 RNASE8Q8TDE3 154 aaKnown RBP14.17□□□□□ -0.14
HDAC1-201ENST00000373548 LINC01549A6NIU2 74 aa14.16□□□□□ -0.14
HDAC1-201ENST00000373548 IGIPA6NJ69 53 aa14.16□□□□□ -0.14
HDAC1-201ENST00000373548 NMUP48645 174 aa14.16□□□□□ -0.14
HDAC1-201ENST00000373548 RS1O15537 224 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 COL5A1-AS1Q5SY13 56 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 ZC2HC1BQ5TFG8 222 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 CHTOPQ9Y3Y2 248 aaKnown RBP14.15□□□□□ -0.14
HDAC1-201ENST00000373548 IGKV2D-26A0A0A0MRZ7 120 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 I3L3M4 83 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 RHODO00212 210 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 PLNP26678 52 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 RHOHQ15669 191 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 PCP2Q8IVA1 136 aa14.15□□□□□ -0.14
HDAC1-201ENST00000373548 MPV17L2Q567V2 206 aa14.14□□□□□ -0.15
HDAC1-201ENST00000373548 GTSCR1Q86UQ5 136 aa14.14□□□□□ -0.15
HDAC1-201ENST00000373548 PRSS29PA6NIE9 313 aa14.14□□□□□ -0.15
HDAC1-201ENST00000373548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-201ENST00000373548 SPATA3Q8NHX4 192 aa14.14□□□□□ -0.15
HDAC1-201ENST00000373548 TMEM263Q8WUH6 116 aaKnown RBP14.14□□□□□ -0.15
HDAC1-201ENST00000373548 Q9UF83 564 aa14.14□□□□□ -0.15
HDAC1-201ENST00000373548 NOTCH3Q9UM47 2321 aa14.13□□□□□ -0.15
HDAC1-201ENST00000373548 DLEU1O43261 78 aa14.12□□□□□ -0.15
HDAC1-201ENST00000373548 TIMM17AQ99595 171 aa14.12□□□□□ -0.15
HDAC1-201ENST00000373548 IGHV3-53P01767 116 aa14.12□□□□□ -0.15
HDAC1-201ENST00000373548 CSNK1G2-AS1Q8NCQ2 148 aa14.12□□□□□ -0.15
HDAC1-201ENST00000373548 TMEM141Q96I45 108 aa14.12□□□□□ -0.15
HDAC1-201ENST00000373548 TRGV1A0A0A0MS02 117 aa14.11□□□□□ -0.15
HDAC1-201ENST00000373548 TNFRSF18Q9Y5U5 241 aa14.11□□□□□ -0.15
HDAC1-201ENST00000373548 C1QTNF4Q9BXJ3 329 aa14.11□□□□□ -0.15
HDAC1-201ENST00000373548 BVES-AS1Q5T3Y7 98 aa14.1□□□□□ -0.15
HDAC1-201ENST00000373548 C20orf203Q8NBC4 194 aa14.1□□□□□ -0.15
HDAC1-201ENST00000373548 Q6ZTI0 123 aa14.09□□□□□ -0.15
HDAC1-201ENST00000373548 TTTY13Q9BZ97 58 aa14.09□□□□□ -0.15
HDAC1-201ENST00000373548 C12orf54Q6X4T0 127 aa14.09□□□□□ -0.15
HDAC1-201ENST00000373548 CITED1Q99966 193 aa14.09□□□□□ -0.15
HDAC1-201ENST00000373548 PMVKQ15126 192 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 PLAC8L1A1L4L8 177 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 SIVA1O15304 175 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 INSL3P51460 131 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 OR4C5Q8NGB2 326 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 CST9LQ9H4G1 147 aa14.08□□□□□ -0.16
HDAC1-201ENST00000373548 C9orf66Q5T8R8 295 aa14.07□□□□□ -0.16
HDAC1-201ENST00000373548 IGLV4-69A0A075B6H9 119 aa14.06□□□□□ -0.16
HDAC1-201ENST00000373548 DAZ2Q13117 558 aaKnown RBP14.06□□□□□ -0.16
HDAC1-201ENST00000373548 C16orf74Q96GX8 76 aa14.06□□□□□ -0.16
HDAC1-201ENST00000373548 ZNF479Q96JC4 524 aa14.06□□□□□ -0.16
HDAC1-201ENST00000373548 DNAJC30Q96LL9 226 aa14.06□□□□□ -0.16
HDAC1-201ENST00000373548 NOP10Q9NPE3 64 aaKnown RBP14.06□□□□□ -0.16
HDAC1-201ENST00000373548 TENM1Q9UKZ4 2725 aa14.06□□□□□ -0.16
HDAC1-201ENST00000373548 OPRPNQ99935 248 aaPredicted RBP14.06□□□□□ -0.16
HDAC1-201ENST00000373548 VWFP04275 2813 aa14.05□□□□□ -0.16
HDAC1-201ENST00000373548 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
HDAC1-201ENST00000373548 C11orf86A6NJI1 115 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms