RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
CHD6-202ENST00000373222 LAGE3Q14657 143 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 OR10J6PQ8NGY7 276 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 IL17DQ8TAD2 202 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 TRAV12-3A0A0B4J271 114 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 IGKCP01834 107 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 KRTAP10-9P60411 292 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 PHLDA3Q9Y5J5 127 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 TRBV25-1A0A075B6N4 114 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 ATP5LO75964 103 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 XGP55808 180 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 DEFB136Q30KP8 78 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 DCANP1Q8TF63 244 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 BBC3Q96PG8 261 aaPredicted RBP4.74□□□□□ -1.65
CHD6-202ENST00000373222 SMIM2Q9BVW6 85 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 DAZ1Q9NQZ3 744 aaKnown RBP4.74□□□□□ -1.65
CHD6-202ENST00000373222 S100A7P31151 101 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 OR1N2Q8NGR9 330 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 FAM19A4Q96LR4 140 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
CHD6-202ENST00000373222 FN1P02751 2386 aaKnown RBP4.73□□□□□ -1.65
CHD6-202ENST00000373222 IGHV4-4A0A075B6R2 117 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 TRAV21A0A0B4J279 112 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 GAGE12BA1L429 117 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 DPM2O94777 84 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 ASIPP42127 132 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
CHD6-202ENST00000373222 PSMG4Q5JS54 123 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 PAPPA-AS1Q5QFB9 102 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 FAM74A4Q5TZK3 123 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 SMIM15Q7Z3B0 74 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 LINC00477Q96M19 166 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 CHAC1Q9BUX1 264 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 CST9LQ9H4G1 147 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 MDFICQ9P1T7 246 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 SMPXQ9UHP9 88 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 PDZD2O15018 2839 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 RHODO00212 210 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 DUSP14O95147 198 aaKnown RBP4.73□□□□□ -1.65
CHD6-202ENST00000373222 PSMB8P28062 276 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 SYNJ2BPP57105 145 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 LINC00315P59091 139 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 NOTCH2Q04721 2471 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 MYOZ3Q8TDC0 251 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 USMG5Q96IX5 58 aa4.73□□□□□ -1.65
CHD6-202ENST00000373222 A0A0G2JLM5 398 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 OVOL1O14753 267 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 CD7P09564 240 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 HTN1P15515 57 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 HSD52Q0P140 79 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 PTH2Q96A98 100 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 CSTL1Q9H114 145 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 DPH3P1Q9H4G8 78 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
CHD6-202ENST00000373222 IGHV4OR15-8A0A075B7B6 117 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 A0A087WW49 117 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 A0A087WX48 190 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 A0A096LNT2 108 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 C9orf118A6NHY6 69 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 B4DSR2 109 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 OXTP01178 125 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 TSHBP01222 138 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 SEC11AP67812 179 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 C2orf66Q6UXQ4 117 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 MTURNQ8N3F0 131 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 SCGB3A1Q96QR1 104 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
CHD6-202ENST00000373222 Q9UF83 564 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 KIF25-AS1Q9Y6Z4 181 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 HECTD1Q9ULT8 2610 aa4.72□□□□□ -1.65
CHD6-202ENST00000373222 KLLNB2CW77 178 aa4.71□□□□□ -1.65
CHD6-202ENST00000373222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.71□□□□□ -1.65
CHD6-202ENST00000373222 UFSP1Q6NVU6 142 aa4.71□□□□□ -1.65
CHD6-202ENST00000373222 KLHL30-AS1Q8NEE0 82 aa4.71□□□□□ -1.65
CHD6-202ENST00000373222 FASNP49327 2511 aaKnown RBP4.71□□□□□ -1.66
CHD6-202ENST00000373222 H3BRM9 83 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 CRYGDP07320 174 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1A1P0DJD3 496 aaKnown RBP4.71□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1CP0DJD4 496 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1FQ15415 496 aaKnown RBP4.71□□□□□ -1.66
CHD6-202ENST00000373222 OCIAD2Q56VL3 154 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 MRAP2Q96G30 205 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 LENEPQ9Y5L5 61 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 TENM1Q9UKZ4 2725 aa4.71□□□□□ -1.66
CHD6-202ENST00000373222 IGHV3-73A0A0B4J1V6 119 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 A6NDN8 102 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 MORN3Q6PF18 240 aaPredicted RBP4.7□□□□□ -1.66
CHD6-202ENST00000373222 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 NEXN-AS1Q8NBZ9 246 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 PHLDA1Q8WV24 401 aaPredicted RBP4.7□□□□□ -1.66
CHD6-202ENST00000373222 TOMM6Q96B49 74 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 PLEKHB2Q96CS7 222 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 ZNF256Q9Y2P7 627 aaPredicted RBP4.7□□□□□ -1.66
CHD6-202ENST00000373222 HIVEP2P31629 2446 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 UNC79Q9P2D8 2635 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 A0A1W2PPM0 123 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms