RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 A6NHS1 94 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 CXCL1P09341 107 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 AKR1C8PQ5T2L2 129 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 LINC00269Q8N2A0 174 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 OR10AG1Q8NH19 301 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 ZNF471Q9BX82 626 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 MED28Q9H204 178 aa8.36□□□□□ -1.07
TRAPPC3-201ENST00000373159 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 SNAI2O43623 268 aa8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 DERL1Q9BUN8 251 aa8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 LRP2P98164 4655 aa8.35□□□□□ -1.07
TRAPPC3-201ENST00000373159 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 F5H697 171 aa8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 GIPP09681 153 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 CST9LP1Q5W188 147 aa8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
TRAPPC3-201ENST00000373159 OR5AL1P0C617 328 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 AKR1C3P42330 323 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 GAGE6Q13070 117 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 SPANXN1Q5VSR9 72 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 CLPSL2Q6UWE3 100 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 STOML3Q8TAV4 291 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
TRAPPC3-201ENST00000373159 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
TRAPPC3-201ENST00000373159 TRAV8-4A0A0B4J246 113 aa8.32□□□□□ -1.08
TRAPPC3-201ENST00000373159 P01737 135 aa8.32□□□□□ -1.08
TRAPPC3-201ENST00000373159 REG3AQ06141 175 aa8.32□□□□□ -1.08
TRAPPC3-201ENST00000373159 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
TRAPPC3-201ENST00000373159 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
TRAPPC3-201ENST00000373159 MUC21A0A0G2JKD1 596 aa8.31□□□□□ -1.08
TRAPPC3-201ENST00000373159 MUC21A0A140T8X8 626 aa8.31□□□□□ -1.08
TRAPPC3-201ENST00000373159 PAGE4O60829 102 aa8.31□□□□□ -1.08
TRAPPC3-201ENST00000373159 BAGE2Q86Y30 109 aa8.31□□□□□ -1.08
TRAPPC3-201ENST00000373159 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 A0A087WYN8 130 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 IGHV1-24A0A0C4DH33 117 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 hDV102S1A0JD36 115 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 SLPIP03973 132 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 GZMBP10144 247 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 C20orf203Q8NBC4 194 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 CYTL1Q9NRR1 136 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 AP5S1Q9NUS5 200 aa8.3□□□□□ -1.08
TRAPPC3-201ENST00000373159 M0QY20 66 aa8.29□□□□□ -1.08
TRAPPC3-201ENST00000373159 SSTP61278 116 aa8.29□□□□□ -1.08
TRAPPC3-201ENST00000373159 SPACA4Q8TDM5 124 aa8.29□□□□□ -1.08
TRAPPC3-201ENST00000373159 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
TRAPPC3-201ENST00000373159 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
TRAPPC3-201ENST00000373159 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
TRAPPC3-201ENST00000373159 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
TRAPPC3-201ENST00000373159 H7C1H1 209 aa8.27□□□□□ -1.09
TRAPPC3-201ENST00000373159 CHTF8P0CG12 524 aa8.27□□□□□ -1.09
TRAPPC3-201ENST00000373159 TMUB2Q71RG4 321 aa8.27□□□□□ -1.09
TRAPPC3-201ENST00000373159 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.09
TRAPPC3-201ENST00000373159 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
TRAPPC3-201ENST00000373159 G3V3Q6 166 aa8.26□□□□□ -1.09
TRAPPC3-201ENST00000373159 TMEM243Q9BU79 118 aa8.26□□□□□ -1.09
TRAPPC3-201ENST00000373159 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
TRAPPC3-201ENST00000373159 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
TRAPPC3-201ENST00000373159 PHOX2AO14813 284 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 ARPC5O15511 151 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 PFDN1O60925 122 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 IGLC6P0CF74 106 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 RAB5CP51148 216 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 C7orf33Q8WU49 177 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
TRAPPC3-201ENST00000373159 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 MGPP08493 103 aa8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 NKX2-5P52952 324 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 PGLYRP4Q96LB8 373 aa8.24□□□□□ -1.09
TRAPPC3-201ENST00000373159 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 RPS10P46783 165 aaKnown RBP8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 CACNG7P62955 275 aa8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 COX6A2Q02221 97 aa8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 FAM213BQ8TBF2 198 aa8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 NIT2Q9NQR4 276 aa8.23□□□□□ -1.09
TRAPPC3-201ENST00000373159 A0A1B0GV50 99 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 NDUFS6O75380 124 aaKnown RBP8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 SULT1A2P50226 295 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 WDR73Q6P4I2 378 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 KCNRGQ8N5I3 272 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 TPPP3Q9BW30 176 aa8.22□□□□□ -1.09
TRAPPC3-201ENST00000373159 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
TRAPPC3-201ENST00000373159 F2Z2F3 143 aa8.21□□□□□ -1.1
TRAPPC3-201ENST00000373159 UBE2L6O14933 153 aa8.21□□□□□ -1.1
TRAPPC3-201ENST00000373159 OR2D3Q8NGH3 330 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms