RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 ANKRD17O75179 2603 aaKnown RBP12.36□□□□□ -0.43
PCIF1-201ENST00000372409 IGHV3-73A0A0B4J1V6 119 aa12.35□□□□□ -0.43
PCIF1-201ENST00000372409 PRB1P04280 392 aa12.35□□□□□ -0.43
PCIF1-201ENST00000372409 NBPF19A0A087WUL8 3843 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 TMEM89A2RUT3 159 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 LGALS3P17931 250 aaKnown RBP12.34□□□□□ -0.43
PCIF1-201ENST00000372409 DEFB136Q30KP8 78 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
PCIF1-201ENST00000372409 J3QQQ9 107 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 UBE2D1P51668 147 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
PCIF1-201ENST00000372409 TSPAN13O95857 204 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 P0DMU3 169 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 RHOHQ15669 191 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.44
PCIF1-201ENST00000372409 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 J3QR89 54 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 PSMB2P49721 201 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 NSUN5P1Q3KNT7 163 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 NF1P21359 2839 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 I3L3M4 83 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
PCIF1-201ENST00000372409 SETD2Q9BYW2 2564 aaPredicted RBP12.32□□□□□ -0.44
PCIF1-201ENST00000372409 USP24Q9UPU5 2620 aa12.32□□□□□ -0.44
PCIF1-201ENST00000372409 PRM2P04554 102 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 ELANEP08246 267 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
PCIF1-201ENST00000372409 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 SLURP1P55000 103 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
PCIF1-201ENST00000372409 PRO0461Q9UI25 63 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 DEFB131AP59861 70 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 C18orf65Q6ZTR6 163 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
PCIF1-201ENST00000372409 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 J3QLI3 93 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
PCIF1-201ENST00000372409 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
PCIF1-201ENST00000372409 PROK1P58294 105 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 NDUFA11Q86Y39 141 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
PCIF1-201ENST00000372409 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 MYO9AB2RTY4 2548 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 VCX2Q9H322 139 aa12.3□□□□□ -0.44
PCIF1-201ENST00000372409 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
PCIF1-201ENST00000372409 INSL3P51460 131 aa12.29□□□□□ -0.44
PCIF1-201ENST00000372409 ZNF418Q8TF45 676 aaPredicted RBP12.29□□□□□ -0.44
PCIF1-201ENST00000372409 A0A096LNT2 108 aa12.29□□□□□ -0.44
PCIF1-201ENST00000372409 A0A0J9YXV3 536 aa12.29□□□□□ -0.44
PCIF1-201ENST00000372409 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
PCIF1-201ENST00000372409 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
PCIF1-201ENST00000372409 KHDC1LQ5JSQ8 128 aa12.28□□□□□ -0.44
PCIF1-201ENST00000372409 Q6YL49 198 aa12.28□□□□□ -0.44
PCIF1-201ENST00000372409 CFC1BP0CG36 223 aa12.28□□□□□ -0.44
PCIF1-201ENST00000372409 CFC1P0CG37 223 aa12.28□□□□□ -0.44
PCIF1-201ENST00000372409 NAV2Q8IVL1 2488 aa12.28□□□□□ -0.44
PCIF1-201ENST00000372409 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.44
PCIF1-201ENST00000372409 TMEM223A0PJW6 202 aa12.27□□□□□ -0.44
PCIF1-201ENST00000372409 AMELXQ99217 191 aa12.27□□□□□ -0.44
PCIF1-201ENST00000372409 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
PCIF1-201ENST00000372409 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.45
PCIF1-201ENST00000372409 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
PCIF1-201ENST00000372409 RHODO00212 210 aa12.26□□□□□ -0.45
PCIF1-201ENST00000372409 LEPROTO15243 131 aa12.26□□□□□ -0.45
PCIF1-201ENST00000372409 CD28P10747 220 aa12.26□□□□□ -0.45
PCIF1-201ENST00000372409 AZU1P20160 251 aa12.26□□□□□ -0.45
PCIF1-201ENST00000372409 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
PCIF1-201ENST00000372409 TRAV2A0A0B4J234 112 aa12.25□□□□□ -0.45
PCIF1-201ENST00000372409 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
PCIF1-201ENST00000372409 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
PCIF1-201ENST00000372409 CFAP126Q5VTH2 177 aa12.25□□□□□ -0.45
PCIF1-201ENST00000372409 SIGMAR1Q99720 223 aa12.25□□□□□ -0.45
PCIF1-201ENST00000372409 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
PCIF1-201ENST00000372409 SCGB1C2P0DMR2 95 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 UBE2D3P61077 147 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 UBE2D2P62837 147 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 LYRM7Q5U5X0 104 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 SPXQ9BT56 116 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 SMCPP49901 116 aaPredicted RBP12.24□□□□□ -0.45
PCIF1-201ENST00000372409 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
PCIF1-201ENST00000372409 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
PCIF1-201ENST00000372409 H3BMM0 161 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
PCIF1-201ENST00000372409 IGHV4-31P0DP07 118 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 C10orf126Q8N4M7 172 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 Q9UF83 564 aa12.24□□□□□ -0.45
PCIF1-201ENST00000372409 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms