RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
CCDC17-201ENST00000372044 NIT2Q9NQR4 276 aa12.99□□□□□ -0.33
CCDC17-201ENST00000372044 A8MZ25 164 aa12.99□□□□□ -0.33
CCDC17-201ENST00000372044 Q8N8P6 123 aa12.99□□□□□ -0.33
CCDC17-201ENST00000372044 SMIM2Q9BVW6 85 aa12.99□□□□□ -0.33
CCDC17-201ENST00000372044 TCAPO15273 167 aa12.98□□□□□ -0.33
CCDC17-201ENST00000372044 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
CCDC17-201ENST00000372044 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
CCDC17-201ENST00000372044 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 RNF183Q96D59 192 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
CCDC17-201ENST00000372044 SMIM9A6NGZ8 99 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 C20orf78Q9BR46 151 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 RETNQ9HD89 108 aa12.97□□□□□ -0.33
CCDC17-201ENST00000372044 ZMAT5Q9UDW3 170 aaKnown RBP12.97□□□□□ -0.33
CCDC17-201ENST00000372044 IGHV4-28A0A0C4DH34 117 aa12.96□□□□□ -0.33
CCDC17-201ENST00000372044 TMEM70Q9BUB7 260 aa12.96□□□□□ -0.33
CCDC17-201ENST00000372044 TRAV4A0A0B4J268 109 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 POLR2KP53803 58 aaKnown RBP12.95□□□□□ -0.34
CCDC17-201ENST00000372044 Q8NAQ8 132 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 ST20Q9HBF5 79 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 SDHAF1A6NFY7 115 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 RHODO00212 210 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 EDA2RQ9HAV5 297 aa12.95□□□□□ -0.34
CCDC17-201ENST00000372044 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
CCDC17-201ENST00000372044 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
CCDC17-201ENST00000372044 ZFP2Q6ZN57 461 aa12.94□□□□□ -0.34
CCDC17-201ENST00000372044 PPP1R17O96001 155 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 DEFB130BP0DP73 79 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 DEFB130AP0DP74 79 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 C3orf79P0CE67 100 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 KRTDAPP60985 99 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 FAM222AQ5U5X8 452 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 LINC00612Q8N6U2 182 aa12.93□□□□□ -0.34
CCDC17-201ENST00000372044 LINC00587B1AMM8 73 aa12.92□□□□□ -0.34
CCDC17-201ENST00000372044 K7EIL1 84 aa12.92□□□□□ -0.34
CCDC17-201ENST00000372044 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
CCDC17-201ENST00000372044 NEXN-AS1Q8NBZ9 246 aa12.92□□□□□ -0.34
CCDC17-201ENST00000372044 HBDP02042 147 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 LAGE3Q14657 143 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 JOSD1Q15040 202 aaPredicted RBP12.91□□□□□ -0.34
CCDC17-201ENST00000372044 KRTAP21-3Q3LHN1 58 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 KPRPQ5T749 579 aaPredicted RBP12.91□□□□□ -0.34
CCDC17-201ENST00000372044 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 MIFP14174 115 aa12.91□□□□□ -0.34
CCDC17-201ENST00000372044 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
CCDC17-201ENST00000372044 TRBV27A0A0K0K1C4 114 aa12.9□□□□□ -0.34
CCDC17-201ENST00000372044 H7C1H1 209 aa12.9□□□□□ -0.34
CCDC17-201ENST00000372044 FCER1GP30273 86 aa12.9□□□□□ -0.34
CCDC17-201ENST00000372044 Q8N976 141 aa12.9□□□□□ -0.34
CCDC17-201ENST00000372044 DKK2Q9UBU2 259 aa12.9□□□□□ -0.34
CCDC17-201ENST00000372044 SLC25A29Q8N8R3 303 aa12.89□□□□□ -0.35
CCDC17-201ENST00000372044 VCYO14598 125 aa12.88□□□□□ -0.35
CCDC17-201ENST00000372044 BTF3P20290 206 aaKnown RBP12.88□□□□□ -0.35
CCDC17-201ENST00000372044 FHL2Q14192 279 aa12.88□□□□□ -0.35
CCDC17-201ENST00000372044 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
CCDC17-201ENST00000372044 K7EQD1 137 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 C18orf15Q96N68 181 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 SCGB1D1O95968 90 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 NUDT3O95989 172 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 TSHBP01222 138 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
CCDC17-201ENST00000372044 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
CCDC17-201ENST00000372044 IGHV3-38A0A0C4DH36 116 aa12.86□□□□□ -0.35
CCDC17-201ENST00000372044 LYRM9A8MSI8 78 aa12.86□□□□□ -0.35
CCDC17-201ENST00000372044 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
CCDC17-201ENST00000372044 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 ORMDL2Q53FV1 153 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
CCDC17-201ENST00000372044 KIR2DL4Q99706 377 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 H0Y8G0 127 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 I3L3M4 83 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 HSPB8Q9UJY1 196 aa12.85□□□□□ -0.35
CCDC17-201ENST00000372044 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
CCDC17-201ENST00000372044 K7EMI3 77 aa12.84□□□□□ -0.35
CCDC17-201ENST00000372044 RPL39P62891 51 aaKnown RBP12.83□□□□□ -0.36
CCDC17-201ENST00000372044 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
CCDC17-201ENST00000372044 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.36
CCDC17-201ENST00000372044 C2orf66Q6UXQ4 117 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 MRAPQ8TCY5 172 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 TRBV6-4A0A1B0GX49 114 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 GAGE1Q13065 139 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 GAGE4Q13068 117 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 GAGE5Q13069 117 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
CCDC17-201ENST00000372044 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
CCDC17-201ENST00000372044 CIDEAO60543 219 aa12.81□□□□□ -0.36
CCDC17-201ENST00000372044 DAD1P61803 113 aa12.81□□□□□ -0.36
CCDC17-201ENST00000372044 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
CCDC17-201ENST00000372044 SPART-AS1P0CW21 52 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms