RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 EMP1P54849 157 aa18.82■□□□□ 0.6
ATPAF1-202ENST00000371937 RNF183Q96D59 192 aa18.82■□□□□ 0.6
ATPAF1-202ENST00000371937 NACAE9PAV3 2078 aa18.82■□□□□ 0.6
ATPAF1-202ENST00000371937 TRGV2A0A075B6R0 118 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 A0A096LNJ9 63 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 GAGE12BA1L429 117 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 SDHAF1A6NFY7 115 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 CIDEAO60543 219 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 GAGE7O76087 117 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 GAGE12FP0CL80 117 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 GAGE12GP0CL81 117 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 GAGE12IP0CL82 117 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 FCER1GP30273 86 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 TCAPO15273 167 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 ORMDL2Q53FV1 153 aa18.81■□□□□ 0.6
ATPAF1-202ENST00000371937 C3orf79P0CE67 100 aa18.8■□□□□ 0.6
ATPAF1-202ENST00000371937 SCGB1D1O95968 90 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 Q6ZSN1 163 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 ZNF479Q96JC4 524 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 TRBV27A0A0K0K1C4 114 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 MIFP14174 115 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 KIR2DL4Q99706 377 aa18.79■□□□□ 0.6
ATPAF1-202ENST00000371937 BTF3P20290 206 aaKnown RBP18.78■□□□□ 0.6
ATPAF1-202ENST00000371937 NBEAL2Q6ZNJ1 2754 aa18.77■□□□□ 0.6
ATPAF1-202ENST00000371937 DNAJC30Q96LL9 226 aa18.77■□□□□ 0.59
ATPAF1-202ENST00000371937 MAP1LC3CQ9BXW4 147 aa18.77■□□□□ 0.59
ATPAF1-202ENST00000371937 TNFRSF18Q9Y5U5 241 aa18.77■□□□□ 0.59
ATPAF1-202ENST00000371937 NUDT3O95989 172 aa18.76■□□□□ 0.59
ATPAF1-202ENST00000371937 LINC00173Q6ZV60 143 aa18.76■□□□□ 0.59
ATPAF1-202ENST00000371937 LINC00612Q8N6U2 182 aa18.75■□□□□ 0.59
ATPAF1-202ENST00000371937 LYRM9A8MSI8 78 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 P0DMU3 169 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 FAM231AP0DMU4 169 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 FAM231CP0DMU5 169 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 NEGR1Q7Z3B1 354 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 C18orf15Q96N68 181 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 IGHV4-28A0A0C4DH34 117 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 G0S2P27469 103 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 TP53TG1Q9Y2A0 90 aa18.74■□□□□ 0.59
ATPAF1-202ENST00000371937 I3L3M4 83 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 Q8NAQ8 132 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 NEXN-AS1Q8NBZ9 246 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 TRBV10-1A0A0K0K1A3 114 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 SYS1-DBNDD2H3BUS1 97 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 DEFB130BP0DP73 79 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 DEFB130AP0DP74 79 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 LURAP1LQ8IV03 231 aa18.72■□□□□ 0.59
ATPAF1-202ENST00000371937 K7EQD1 137 aa18.7■□□□□ 0.58
ATPAF1-202ENST00000371937 FAM222AQ5U5X8 452 aa18.7■□□□□ 0.58
ATPAF1-202ENST00000371937 CDPF1Q6NVV7 123 aa18.7■□□□□ 0.58
ATPAF1-202ENST00000371937 TRGV4A0A0C4DH28 118 aa18.69■□□□□ 0.58
ATPAF1-202ENST00000371937 PET117Q6UWS5 81 aa18.69■□□□□ 0.58
ATPAF1-202ENST00000371937 Q8N976 141 aa18.69■□□□□ 0.58
ATPAF1-202ENST00000371937 IFI27L1Q96BM0 104 aa18.69■□□□□ 0.58
ATPAF1-202ENST00000371937 DKK2Q9UBU2 259 aa18.69■□□□□ 0.58
ATPAF1-202ENST00000371937 DNAH3Q8TD57 4116 aa18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 LINC01549A6NIU2 74 aa18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 KPRPQ5T749 579 aaPredicted RBP18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 SLC25A29Q8N8R3 303 aa18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 Q9UF83 564 aa18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 NOTCH1P46531 2555 aa18.68■□□□□ 0.58
ATPAF1-202ENST00000371937 TRBV6-4A0A1B0GX49 114 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 ATP5LO75964 103 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 S100A12P80511 92 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 RHOHQ15669 191 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 SPATA12Q7Z6I5 190 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 TOMM6Q96B49 74 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 C20orf202A1L168 122 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 DEFB4AO15263 64 aa18.67■□□□□ 0.58
ATPAF1-202ENST00000371937 TRBV7-3A0A075B6L6 115 aa18.66■□□□□ 0.58
ATPAF1-202ENST00000371937 RPL36AP83881 106 aaKnown RBP18.66■□□□□ 0.58
ATPAF1-202ENST00000371937 C2orf66Q6UXQ4 117 aa18.66■□□□□ 0.58
ATPAF1-202ENST00000371937 RPL36ALQ969Q0 106 aaKnown RBP18.66■□□□□ 0.58
ATPAF1-202ENST00000371937 TSHBP01222 138 aa18.65■□□□□ 0.58
ATPAF1-202ENST00000371937 FHL2Q14192 279 aa18.65■□□□□ 0.58
ATPAF1-202ENST00000371937 RIPPLY3P57055 190 aa18.65■□□□□ 0.58
ATPAF1-202ENST00000371937 CYSLTR1Q9Y271 337 aa18.65■□□□□ 0.58
ATPAF1-202ENST00000371937 NBEAL1Q6ZS30 2694 aa18.64■□□□□ 0.57
ATPAF1-202ENST00000371937 ZNRF2Q8NHG8 242 aa18.64■□□□□ 0.57
ATPAF1-202ENST00000371937 H0Y8G0 127 aa18.63■□□□□ 0.57
ATPAF1-202ENST00000371937 SPART-AS1P0CW21 52 aa18.63■□□□□ 0.57
ATPAF1-202ENST00000371937 TEX43Q6ZNM6 134 aa18.63■□□□□ 0.57
ATPAF1-202ENST00000371937 DEFB104AQ8WTQ1 72 aa18.63■□□□□ 0.57
ATPAF1-202ENST00000371937 MGAM2Q2M2H8 2515 aa18.62■□□□□ 0.57
ATPAF1-202ENST00000371937 SCGB3A1Q96QR1 104 aa18.62■□□□□ 0.57
ATPAF1-202ENST00000371937 TEX48A0A1B0GUV7 120 aa18.61■□□□□ 0.57
ATPAF1-202ENST00000371937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-202ENST00000371937 DAD1P61803 113 aa18.61■□□□□ 0.57
ATPAF1-202ENST00000371937 PRADC1Q9BSG0 188 aa18.61■□□□□ 0.57
ATPAF1-202ENST00000371937 PRB2P02812 416 aaPredicted RBP18.6■□□□□ 0.57
ATPAF1-202ENST00000371937 LINC01545Q5VT33 79 aa18.6■□□□□ 0.57
ATPAF1-202ENST00000371937 ERASQ7Z444 233 aa18.6■□□□□ 0.57
ATPAF1-202ENST00000371937 HHLA3Q9XRX5 114 aa18.6■□□□□ 0.57
ATPAF1-202ENST00000371937 PRSS1P07477 247 aa18.59■□□□□ 0.57
ATPAF1-202ENST00000371937 COTL1Q14019 142 aa18.59■□□□□ 0.57
ATPAF1-202ENST00000371937 DAZ4Q86SG3 579 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-202ENST00000371937 RETNQ9HD89 108 aa18.59■□□□□ 0.57
ATPAF1-202ENST00000371937 DAZ3Q9NR90 486 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-202ENST00000371937 K7EIL1 84 aa18.58■□□□□ 0.57
ATPAF1-202ENST00000371937 UBE2D3P61077 147 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms