RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 A0A096LNJ9 63 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 LOC100131303A0A0U1RQF7 123 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 LOC389332A0A1B0GUA5 103 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 RHODO00212 210 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 PPBPP02775 128 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 ESDP10768 282 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
LCN1-202ENST00000371781 PDZD11Q5EBL8 140 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 DEFB121Q5J5C9 76 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 ZFP2Q6ZN57 461 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
LCN1-202ENST00000371781 TRGV2A0A075B6R0 118 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 A0A0J9YWU9 116 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 F5H697 171 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 C12orf74Q32Q52 190 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 NIT1Q86X76 327 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 SMIM2Q9BVW6 85 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 LAMTOR2Q9Y2Q5 125 aa7.65□□□□□ -1.18
LCN1-202ENST00000371781 LINC01546A6NGU7 62 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
LCN1-202ENST00000371781 SUMO2P61956 95 aaKnown RBP7.64□□□□□ -1.19
LCN1-202ENST00000371781 BAGE3Q86Y29 109 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 TMEM70Q9BUB7 260 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 MAP1LC3AQ9H492 121 aa7.64□□□□□ -1.19
LCN1-202ENST00000371781 K7EQD1 137 aa7.63□□□□□ -1.19
LCN1-202ENST00000371781 PMCHL1Q16048 86 aa7.63□□□□□ -1.19
LCN1-202ENST00000371781 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
LCN1-202ENST00000371781 DNAH1Q9P2D7 4330 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 IGHV1-24A0A0C4DH33 117 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 TCAPO15273 167 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 S100A6P06703 90 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 SPART-AS1P0CW21 52 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 DAD1P61803 113 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 RPL32P62910 135 aaKnown RBP7.62□□□□□ -1.19
LCN1-202ENST00000371781 FAM19A2Q8N3H0 131 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 Q8N8P6 123 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 VSIG2Q96IQ7 327 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 HIST1H2BLQ99880 126 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 C20orf78Q9BR46 151 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 NIT2Q9NQR4 276 aa7.62□□□□□ -1.19
LCN1-202ENST00000371781 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 TSHBP01222 138 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 LINC00614P0C842 121 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 PMCHP20382 165 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 CRYBA4P53673 196 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 NANOS2P60321 138 aaKnown RBP7.61□□□□□ -1.19
LCN1-202ENST00000371781 Q6ZTC4 211 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 ST20Q9HBF5 79 aa7.61□□□□□ -1.19
LCN1-202ENST00000371781 CHCHD1Q96BP2 118 aaKnown RBP7.6□□□□□ -1.19
LCN1-202ENST00000371781 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
LCN1-202ENST00000371781 TRGV4A0A0C4DH28 118 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 IGHV3-38A0A0C4DH36 116 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 TRBV10-1A0A0K0K1A3 114 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 TRBV6-4A0A1B0GX49 114 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 UBE2D3P61077 147 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 UBE2D2P62837 147 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 GAGE1Q13065 139 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 GAGE4Q13068 117 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 GAGE5Q13069 117 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 FA2HQ7L5A8 372 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 PRSS3P2Q8NHM4 247 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 PHLDA1Q8WV24 401 aaPredicted RBP7.59□□□□□ -1.19
LCN1-202ENST00000371781 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
LCN1-202ENST00000371781 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
LCN1-202ENST00000371781 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 H7C1H1 209 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 CIDEAO60543 219 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 HSBP1O75506 76 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 ATP5G1P05496 136 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 HTN3P15516 51 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 AMTP48728 403 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 RHOHQ15669 191 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 ZNRF2Q8NHG8 242 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 DNAJC30Q96LL9 226 aa7.58□□□□□ -1.2
LCN1-202ENST00000371781 A0A0J9YY99 117 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 PPP1R17O96001 155 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 FABP4P15090 132 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 HHLA3Q9XRX5 114 aa7.57□□□□□ -1.2
LCN1-202ENST00000371781 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
LCN1-202ENST00000371781 TRAV26-1A0A087WT03 109 aa7.56□□□□□ -1.2
LCN1-202ENST00000371781 F5H768 121 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms