RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
PDE6C-201ENST00000371447 OR9G4Q8NGQ1 327 aa8.7□□□□□ -1.02
PDE6C-201ENST00000371447 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 CD28P10747 220 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 KIR2DL4Q99706 377 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 ESM1Q9NQ30 184 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 DEFB125Q8N687 156 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 NHP2Q9NX24 153 aaKnown RBP8.69□□□□□ -1.02
PDE6C-201ENST00000371447 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
PDE6C-201ENST00000371447 ATRQ13535 2644 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 A0A087WX48 190 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 FXYD2P54710 66 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 NSUN5P1Q3KNT7 163 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 KRTAP1-3Q8IUG1 177 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 AKAP9Q99996 3911 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 IGHV3-53P01767 116 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
PDE6C-201ENST00000371447 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
PDE6C-201ENST00000371447 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
PDE6C-201ENST00000371447 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 MRPL16Q9NX20 251 aaKnown RBP8.68□□□□□ -1.02
PDE6C-201ENST00000371447 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
PDE6C-201ENST00000371447 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 WFDC10AQ9H1F0 79 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
PDE6C-201ENST00000371447 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
PDE6C-201ENST00000371447 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
PDE6C-201ENST00000371447 LINC00315P59091 139 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 H7C1H1 209 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
PDE6C-201ENST00000371447 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 B5MCH6 92 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 FSHBP01225 129 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 VCX2Q9H322 139 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 OR11H12B2RN74 326 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 F8VRH5 84 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 C20orf78Q9BR46 151 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 PDZD2O15018 2839 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 OTOGQ6ZRI0 2925 aa8.66□□□□□ -1.02
PDE6C-201ENST00000371447 M0QXV9 152 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 PEMTQ9UBM1 199 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 A6NDN8 102 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 H3BMM0 161 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 CRYGDP07320 174 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 HSD52Q0P140 79 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 MTURNQ8N3F0 131 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 TOMM6Q96B49 74 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 RAX2Q96IS3 184 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 VWFP04275 2813 aa8.65□□□□□ -1.02
PDE6C-201ENST00000371447 VCYO14598 125 aa8.65□□□□□ -1.03
PDE6C-201ENST00000371447 ZNF580Q9UK33 172 aa8.65□□□□□ -1.03
PDE6C-201ENST00000371447 G3V4G9 280 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
PDE6C-201ENST00000371447 AMTNQ6UX39 209 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
PDE6C-201ENST00000371447 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 CCL24O00175 119 aa8.64□□□□□ -1.03
PDE6C-201ENST00000371447 ZNF815PA8K554 130 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 LGALS9O00182 355 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 HLA-DRB4P13762 266 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 DEFB114Q30KQ6 69 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 HLA-DRB4X5D2U9 266 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 M0QY20 66 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 PLNP26678 52 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDE6C-201ENST00000371447 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
PDE6C-201ENST00000371447 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
PDE6C-201ENST00000371447 TEP1Q99973 2627 aaKnown RBP8.63□□□□□ -1.03
PDE6C-201ENST00000371447 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 Q6ZSN1 163 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 STHQ8IWL8 128 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 TSHBP01222 138 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 C9orf85Q96MD7 179 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 ZMAT4Q9H898 229 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 PLA2G2AP14555 144 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 SEC11AP67812 179 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 TNFRSF18Q9Y5U5 241 aa8.62□□□□□ -1.03
PDE6C-201ENST00000371447 J3QKU1 62 aa8.61□□□□□ -1.03
PDE6C-201ENST00000371447 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
PDE6C-201ENST00000371447 TRGV11A0A075B6L2 103 aa8.61□□□□□ -1.03
PDE6C-201ENST00000371447 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
PDE6C-201ENST00000371447 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
PDE6C-201ENST00000371447 TSSC4Q9Y5U2 329 aaPredicted RBP8.61□□□□□ -1.03
PDE6C-201ENST00000371447 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 PPP1R17O96001 155 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms