RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 Q6ZSV7 163 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NTN5Q8WTR8 489 aaPredicted RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SPXQ9BT56 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 AGPAT4-IT1Q9H0P7 198 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 YAE1D1Q9NRH1 226 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF580Q9UK33 172 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SLC25A20O43772 301 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SYNJ2BPP57105 145 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 DEFB136Q30KP8 78 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NXT2Q9NPJ8 142 aaKnown RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NF1P21359 2839 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GCN1Q92616 2671 aaKnown RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 A8MWV9 139 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 C9JAW5 83 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 LAGE3Q14657 143 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 ZFP36P26651 326 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 CFHR3Q02985 330 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 EEF1AKMT3Q96AZ1 226 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 GNLYP22749 145 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 ASIPP42127 132 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 RPL39P62891 51 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 C15orf53Q8NAA6 179 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV8-2A0A0B4J237 113 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 H7C1H1 209 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 PLNP26678 52 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 PRR9Q5T870 116 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 TMEM263Q8WUH6 116 aaKnown RBP6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 OXTP01178 125 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 Q6Q795 121 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 C10orf126Q8N4M7 172 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 FBN2P35556 2912 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 DAND5Q8N907 189 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 IGHV3-33P01772 117 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 GATA4P43694 442 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 EBI3Q14213 229 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 C10orf99Q6UWK7 81 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV41A0A0B4J266 112 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 CTSGP08311 255 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 EDN2P20800 178 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 UBR5O95071 2799 aaPredicted RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 DUSP14O95147 198 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 HERVK_113P61574 105 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 A4D1N5 150 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 PRB1P04280 392 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 MRPL23Q16540 153 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 Q8NA96 180 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 DYNLRB2Q8TF09 96 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 SNCGO76070 127 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 C9orf47Q6ZRZ4 202 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 LGALS9O00182 355 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 IGHV7-81A0A0B4J1V7 117 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 H7C423 109 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 IGHV4-38-2P0DP08 117 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 GPHB5Q86YW7 130 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 NUP37Q8NFH4 326 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 TRIAP1O43715 76 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 P0DMU3 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 CCL19Q99731 98 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 PRO1854Q9UHT4 67 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 IGLV1-47P01700 117 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 M0R2P5 195 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 NPFFO15130 113 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 XCL2Q9UBD3 114 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms