RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 HIGD1BQ9P298 99 aa8.51□□□□□ -1.05
RAB39B-201ENST00000369454 IGHV3OR16-12A0A075B7B8 117 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
RAB39B-201ENST00000369454 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 SYT8Q8NBV8 401 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 PPP1R17O96001 155 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
RAB39B-201ENST00000369454 Q9UF83 564 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
RAB39B-201ENST00000369454 TENM4Q6N022 2769 aa8.5□□□□□ -1.05
RAB39B-201ENST00000369454 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 NXPH4O95158 308 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
RAB39B-201ENST00000369454 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
RAB39B-201ENST00000369454 UFSP1Q6NVU6 142 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 DLX4Q92988 240 aaPredicted RBP8.49□□□□□ -1.05
RAB39B-201ENST00000369454 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 ZNF580Q9UK33 172 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 M0QY20 66 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 DYNLRB2Q8TF09 96 aa8.49□□□□□ -1.05
RAB39B-201ENST00000369454 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
RAB39B-201ENST00000369454 SAMD13Q5VXD3 122 aa8.48□□□□□ -1.05
RAB39B-201ENST00000369454 CEMP1Q6PRD7 247 aaPredicted RBP8.48□□□□□ -1.05
RAB39B-201ENST00000369454 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
RAB39B-201ENST00000369454 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
RAB39B-201ENST00000369454 RIPPLY3P57055 190 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 PMVKQ15126 192 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 ZNF479Q96JC4 524 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
RAB39B-201ENST00000369454 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 APOMO95445 188 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 LINC01619G3V211 115 aa8.47□□□□□ -1.05
RAB39B-201ENST00000369454 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.05
RAB39B-201ENST00000369454 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.05
RAB39B-201ENST00000369454 E9PLD3 99 aa8.46□□□□□ -1.05
RAB39B-201ENST00000369454 H3BMG7 143 aa8.46□□□□□ -1.05
RAB39B-201ENST00000369454 LGALS9O00182 355 aa8.46□□□□□ -1.05
RAB39B-201ENST00000369454 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.05
RAB39B-201ENST00000369454 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.05
RAB39B-201ENST00000369454 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 IGLL5B9A064 214 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 LINC01587Q99440 93 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 K7ERU9 68 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 XCL2Q9UBD3 114 aa8.46□□□□□ -1.06
RAB39B-201ENST00000369454 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.06
RAB39B-201ENST00000369454 TRBV27A0A0K0K1C4 114 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 TRBV7-3A0A075B6L6 115 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
RAB39B-201ENST00000369454 SETXQ7Z333 2677 aaKnown RBP8.45□□□□□ -1.06
RAB39B-201ENST00000369454 H3BMM0 161 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 FSHBP01225 129 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
RAB39B-201ENST00000369454 POM121L12Q8N7R1 296 aa8.45□□□□□ -1.06
RAB39B-201ENST00000369454 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
RAB39B-201ENST00000369454 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
RAB39B-201ENST00000369454 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
RAB39B-201ENST00000369454 HERVK_113P61574 105 aa8.44□□□□□ -1.06
RAB39B-201ENST00000369454 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
RAB39B-201ENST00000369454 FASNP49327 2511 aaKnown RBP8.44□□□□□ -1.06
RAB39B-201ENST00000369454 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 Q6ZSN1 163 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 I3L3M4 83 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 WFDC2Q14508 124 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 HECTD1Q9ULT8 2610 aa8.43□□□□□ -1.06
RAB39B-201ENST00000369454 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 SPXQ9BT56 116 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 PEMTQ9UBM1 199 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 CD28P10747 220 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 Q6ZSV7 163 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 VCX2Q9H322 139 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
RAB39B-201ENST00000369454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
RAB39B-201ENST00000369454 TEX48A0A1B0GUV7 120 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
RAB39B-201ENST00000369454 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
RAB39B-201ENST00000369454 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 TRBV6-5A0A0K0K1A5 114 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 H7C2G1 150 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 J3QQQ9 107 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 TAL2Q16559 108 aa8.41□□□□□ -1.06
RAB39B-201ENST00000369454 AZU1P20160 251 aa8.4□□□□□ -1.06
RAB39B-201ENST00000369454 RRN3P1Q2M238 152 aa8.4□□□□□ -1.06
RAB39B-201ENST00000369454 DEFB114Q30KQ6 69 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms