RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SMIM2Q9BVW6 85 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 TRGV2A0A075B6R0 118 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 LYRM9A8MSI8 78 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 IGHV3-53P01767 116 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 AMTP48728 403 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 FAM19A2Q8N3H0 131 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 C18orf15Q96N68 181 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 RPL32P62910 135 aaKnown RBP17■□□□□ 0.31
SNX3-203ENST00000368979 ST20Q9HBF5 79 aa17■□□□□ 0.31
SNX3-203ENST00000368979 RETNQ9HD89 108 aa17■□□□□ 0.31
SNX3-203ENST00000368979 NIT2Q9NQR4 276 aa17■□□□□ 0.31
SNX3-203ENST00000368979 CIDEAO60543 219 aa16.99■□□□□ 0.31
SNX3-203ENST00000368979 FAM222AQ5U5X8 452 aa16.99■□□□□ 0.31
SNX3-203ENST00000368979 NBEAL1Q6ZS30 2694 aa16.99■□□□□ 0.31
SNX3-203ENST00000368979 IGHV1-24A0A0C4DH33 117 aa16.98■□□□□ 0.31
SNX3-203ENST00000368979 DEFB4AO15263 64 aa16.98■□□□□ 0.31
SNX3-203ENST00000368979 DKK2Q9UBU2 259 aa16.98■□□□□ 0.31
SNX3-203ENST00000368979 AKR1D1P51857 326 aa16.97■□□□□ 0.31
SNX3-203ENST00000368979 POLR2KP53803 58 aaKnown RBP16.97■□□□□ 0.31
SNX3-203ENST00000368979 PMCHL1Q16048 86 aa16.97■□□□□ 0.31
SNX3-203ENST00000368979 OR10D4PQ8NGN7 298 aa16.96■□□□□ 0.31
SNX3-203ENST00000368979 TMEM70Q9BUB7 260 aa16.96■□□□□ 0.31
SNX3-203ENST00000368979 P0DMU3 169 aa16.96■□□□□ 0.3
SNX3-203ENST00000368979 FAM231AP0DMU4 169 aa16.96■□□□□ 0.3
SNX3-203ENST00000368979 FAM231CP0DMU5 169 aa16.96■□□□□ 0.3
SNX3-203ENST00000368979 DEFB130BP0DP73 79 aa16.96■□□□□ 0.3
SNX3-203ENST00000368979 DEFB130AP0DP74 79 aa16.96■□□□□ 0.3
SNX3-203ENST00000368979 SDHAF1A6NFY7 115 aa16.95■□□□□ 0.3
SNX3-203ENST00000368979 SBSPONQ8IVN8 264 aa16.95■□□□□ 0.3
SNX3-203ENST00000368979 A0A096LNJ9 63 aa16.94■□□□□ 0.3
SNX3-203ENST00000368979 NEXN-AS1Q8NBZ9 246 aa16.93■□□□□ 0.3
SNX3-203ENST00000368979 CELA1Q9UNI1 258 aa16.93■□□□□ 0.3
SNX3-203ENST00000368979 TRBV27A0A0K0K1C4 114 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 K7EMI3 77 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 K7EQD1 137 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 TCAPO15273 167 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 DNAJC30Q96LL9 226 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 Q9UF83 564 aa16.92■□□□□ 0.3
SNX3-203ENST00000368979 VCYO14598 125 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 FHL2Q14192 279 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 DEFB121Q5J5C9 76 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 NEGR1Q7Z3B1 354 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 LAGE3Q14657 143 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 SLC25A29Q8N8R3 303 aa16.91■□□□□ 0.3
SNX3-203ENST00000368979 NOTCH1P46531 2555 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 TRGV4A0A0C4DH28 118 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 TRBV10-1A0A0K0K1A3 114 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 TRBV6-4A0A1B0GX49 114 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 HBDP02042 147 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 SPART-AS1P0CW21 52 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 TM2D3Q9BRN9 247 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 C11orf68Q9H3H3 251 aaKnown RBP16.9■□□□□ 0.3
SNX3-203ENST00000368979 TNFRSF18Q9Y5U5 241 aa16.9■□□□□ 0.3
SNX3-203ENST00000368979 MGAM2Q2M2H8 2515 aa16.89■□□□□ 0.29
SNX3-203ENST00000368979 TEX48A0A1B0GUV7 120 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 FCER1GP30273 86 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 DAD1P61803 113 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 ORMDL2Q53FV1 153 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 SPATA25Q9BR10 227 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 NBEAL2Q6ZNJ1 2754 aa16.88■□□□□ 0.29
SNX3-203ENST00000368979 LEPROTL1O95214 131 aa16.87■□□□□ 0.29
SNX3-203ENST00000368979 KIR2DL4Q99706 377 aa16.87■□□□□ 0.29
SNX3-203ENST00000368979 I3L3M4 83 aa16.86■□□□□ 0.29
SNX3-203ENST00000368979 RHOHQ15669 191 aa16.85■□□□□ 0.29
SNX3-203ENST00000368979 LINC00173Q6ZV60 143 aa16.85■□□□□ 0.29
SNX3-203ENST00000368979 TRBV7-3A0A075B6L6 115 aa16.84■□□□□ 0.29
SNX3-203ENST00000368979 TSHBP01222 138 aa16.84■□□□□ 0.29
SNX3-203ENST00000368979 RPL36AP83881 106 aaKnown RBP16.84■□□□□ 0.29
SNX3-203ENST00000368979 ZNRF2Q8NHG8 242 aa16.84■□□□□ 0.29
SNX3-203ENST00000368979 MRAPQ8TCY5 172 aa16.84■□□□□ 0.29
SNX3-203ENST00000368979 RPL36ALQ969Q0 106 aaKnown RBP16.84■□□□□ 0.29
SNX3-203ENST00000368979 NUDT3O95989 172 aa16.83■□□□□ 0.28
SNX3-203ENST00000368979 HSPB8Q9UJY1 196 aa16.83■□□□□ 0.28
SNX3-203ENST00000368979 C3orf79P0CE67 100 aa16.82■□□□□ 0.28
SNX3-203ENST00000368979 PYY3Q5JQD4 70 aa16.82■□□□□ 0.28
SNX3-203ENST00000368979 HHLA3Q9XRX5 114 aa16.82■□□□□ 0.28
SNX3-203ENST00000368979 ATP5G1P05496 136 aa16.81■□□□□ 0.28
SNX3-203ENST00000368979 BTF3P20290 206 aaKnown RBP16.81■□□□□ 0.28
SNX3-203ENST00000368979 DEFB104AQ8WTQ1 72 aa16.81■□□□□ 0.28
SNX3-203ENST00000368979 PRADC1Q9BSG0 188 aa16.81■□□□□ 0.28
SNX3-203ENST00000368979 CRYBA4P53673 196 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 KRTDAPP60985 99 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 UBE2D3P61077 147 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 UBE2D2P62837 147 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 JOSD1Q15040 202 aaPredicted RBP16.8■□□□□ 0.28
SNX3-203ENST00000368979 LOC100131303A0A0U1RQF7 123 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 GAGE12JA6NER3 117 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 SMIM6P0DI80 62 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 GAGE1Q13065 139 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 GAGE4Q13068 117 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 GAGE5Q13069 117 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 C12orf74Q32Q52 190 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 GAGE13Q4V321 117 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 PRO0255Q9UI72 69 aa16.8■□□□□ 0.28
SNX3-203ENST00000368979 A0A0J9YWU9 116 aa16.79■□□□□ 0.28
SNX3-203ENST00000368979 LINC00694P0DN24 101 aa16.79■□□□□ 0.28
SNX3-203ENST00000368979 PHLDA1Q8WV24 401 aaPredicted RBP16.79■□□□□ 0.28
SNX3-203ENST00000368979 TOMM6Q96B49 74 aa16.79■□□□□ 0.28
SNX3-203ENST00000368979 C2orf66Q6UXQ4 117 aa16.78■□□□□ 0.28
SNX3-203ENST00000368979 IGHV3-38A0A0C4DH36 116 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms