RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 RS1O15537 224 aa13.05□□□□□ -0.32
LMNA-204ENST00000368298 FAM104BQ5XKR9 115 aa13.05□□□□□ -0.32
LMNA-204ENST00000368298 OR4C5Q8NGB2 326 aa13.05□□□□□ -0.32
LMNA-204ENST00000368298 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
LMNA-204ENST00000368298 SNAI2O43623 268 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 IGHV3-53P01767 116 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 VSIG2Q96IQ7 327 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 NIT2Q9NQR4 276 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 NACAE9PAV3 2078 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 CACNG7P62955 275 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 DMRTA1Q5VZB9 504 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 AMN1Q8IY45 258 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 MSRB1Q9NZV6 116 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 HHLA3Q9XRX5 114 aa13.04□□□□□ -0.32
LMNA-204ENST00000368298 A8MWV9 139 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 PMCHP20382 165 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 CRYBA4P53673 196 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
LMNA-204ENST00000368298 RNASEKQ6P5S7 137 aaKnown RBP13.03□□□□□ -0.32
LMNA-204ENST00000368298 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 OR10AG1Q8NH19 301 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
LMNA-204ENST00000368298 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 NXPH4O95158 308 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 P0DMU3 169 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 AMTP48728 403 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.33
LMNA-204ENST00000368298 NIT1Q86X76 327 aa13.02□□□□□ -0.33
LMNA-204ENST00000368298 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
LMNA-204ENST00000368298 A0A0J9YY99 117 aa13.01□□□□□ -0.33
LMNA-204ENST00000368298 LY6G6CO95867 125 aa13.01□□□□□ -0.33
LMNA-204ENST00000368298 CDPF1Q6NVV7 123 aa13.01□□□□□ -0.33
LMNA-204ENST00000368298 ZFP2Q6ZN57 461 aa13.01□□□□□ -0.33
LMNA-204ENST00000368298 D6R8Y8 96 aa13□□□□□ -0.33
LMNA-204ENST00000368298 PAX4O43316 350 aa13□□□□□ -0.33
LMNA-204ENST00000368298 HSBP1O75506 76 aa13□□□□□ -0.33
LMNA-204ENST00000368298 SPANXN1Q5VSR9 72 aa13□□□□□ -0.33
LMNA-204ENST00000368298 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
LMNA-204ENST00000368298 URB1-AS1Q96HZ7 61 aa13□□□□□ -0.33
LMNA-204ENST00000368298 NUDT3O95989 172 aa12.99□□□□□ -0.33
LMNA-204ENST00000368298 GATA1P15976 413 aaPredicted RBP12.99□□□□□ -0.33
LMNA-204ENST00000368298 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
LMNA-204ENST00000368298 ORMDL3Q8N138 153 aa12.99□□□□□ -0.33
LMNA-204ENST00000368298 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
LMNA-204ENST00000368298 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
LMNA-204ENST00000368298 RAB4AP20338 218 aa12.98□□□□□ -0.33
LMNA-204ENST00000368298 FAM19A2Q8N3H0 131 aa12.98□□□□□ -0.33
LMNA-204ENST00000368298 CHCHD1Q96BP2 118 aaKnown RBP12.98□□□□□ -0.33
LMNA-204ENST00000368298 A0A096LPF7 62 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 TRBV6-4A0A1B0GX49 114 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 M0R381 172 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 JPT2Q9H910 190 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 HYDINQ4G0P3 5121 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 PCP4L1A6NKN8 68 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 CKS2P33552 79 aa12.97□□□□□ -0.33
LMNA-204ENST00000368298 RHODO00212 210 aa12.96□□□□□ -0.34
LMNA-204ENST00000368298 NCR2O95944 276 aa12.96□□□□□ -0.34
LMNA-204ENST00000368298 CRYGDP07320 174 aa12.96□□□□□ -0.34
LMNA-204ENST00000368298 LINC00614P0C842 121 aa12.96□□□□□ -0.34
LMNA-204ENST00000368298 ICOSQ9Y6W8 199 aa12.96□□□□□ -0.34
LMNA-204ENST00000368298 EVI2AP22794 236 aa12.95□□□□□ -0.34
LMNA-204ENST00000368298 MRPL23Q16540 153 aaKnown RBP12.95□□□□□ -0.34
LMNA-204ENST00000368298 SLC25A29Q8N8R3 303 aa12.95□□□□□ -0.34
LMNA-204ENST00000368298 K7EQD1 137 aa12.94□□□□□ -0.34
LMNA-204ENST00000368298 SCGB1D1O95968 90 aa12.94□□□□□ -0.34
LMNA-204ENST00000368298 PPBPP02775 128 aa12.94□□□□□ -0.34
LMNA-204ENST00000368298 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
LMNA-204ENST00000368298 IGHV3-73A0A0B4J1V6 119 aa12.93□□□□□ -0.34
LMNA-204ENST00000368298 NPYP01303 97 aa12.93□□□□□ -0.34
LMNA-204ENST00000368298 CCL18P55774 89 aa12.93□□□□□ -0.34
LMNA-204ENST00000368298 PRSS3P2Q8NHM4 247 aa12.93□□□□□ -0.34
LMNA-204ENST00000368298 LOC389332A0A1B0GUA5 103 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 GYPEP15421 78 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 KRTDAPP60985 99 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 RHOHQ15669 191 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 Q6ZSN1 163 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
LMNA-204ENST00000368298 A0A087WWL8 130 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 IGHV1-24A0A0C4DH33 117 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 PMCHL1Q16048 86 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 ESRGQ1W209 222 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 NEGR1Q7Z3B1 354 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 LINC00588Q9Y4M8 146 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 IFI27P40305 119 aaPredicted RBP12.91□□□□□ -0.34
LMNA-204ENST00000368298 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 MAP1LC3AQ9H492 121 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 KIF25-AS1Q9Y6Z4 181 aa12.91□□□□□ -0.34
LMNA-204ENST00000368298 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
LMNA-204ENST00000368298 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
LMNA-204ENST00000368298 DPH3P1Q9H4G8 78 aa12.9□□□□□ -0.34
LMNA-204ENST00000368298 AP5S1Q9NUS5 200 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms