RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TRAV2A0A0B4J234 112 aa9.15□□□□□ -0.94
PTPN7-202ENST00000367279 A0A0J9YY99 117 aa9.15□□□□□ -0.94
PTPN7-202ENST00000367279 J3QQQ9 107 aa9.15□□□□□ -0.94
PTPN7-202ENST00000367279 CFHR3Q02985 330 aa9.15□□□□□ -0.94
PTPN7-202ENST00000367279 DLX4Q92988 240 aaPredicted RBP9.15□□□□□ -0.94
PTPN7-202ENST00000367279 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.94
PTPN7-202ENST00000367279 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 COX6B1P14854 86 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 SIGMAR1Q99720 223 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 M0QY20 66 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 PTH2Q96A98 100 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 K7EQG2 157 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 LGALS9O00182 355 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
PTPN7-202ENST00000367279 PROK1P58294 105 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
PTPN7-202ENST00000367279 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 VCX2Q9H322 139 aa9.14□□□□□ -0.95
PTPN7-202ENST00000367279 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 DEFB131AP59861 70 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 TCTEX1D4Q5JR98 221 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
PTPN7-202ENST00000367279 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 BRI3O95415 125 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 SLURP1P55000 103 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 Q1RN00 199 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 SPXQ9BT56 116 aa9.13□□□□□ -0.95
PTPN7-202ENST00000367279 PTPN13Q12923 2485 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 LINC01619G3V211 115 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 NDUFA11Q86Y39 141 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 POM121L12Q8N7R1 296 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 LINC01356Q8N9X3 169 aa9.12□□□□□ -0.95
PTPN7-202ENST00000367279 SONP18583 2426 aaKnown RBP9.12□□□□□ -0.95
PTPN7-202ENST00000367279 IGSF10Q6WRI0 2623 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 I3L3M4 83 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 CD28P10747 220 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 ZNF580Q9UK33 172 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 SETD2Q9BYW2 2564 aaPredicted RBP9.11□□□□□ -0.95
PTPN7-202ENST00000367279 PRSS2P07478 247 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 UBE2D1P51668 147 aa9.11□□□□□ -0.95
PTPN7-202ENST00000367279 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 CFC1P0CG37 223 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 TRGV11A0A075B6L2 103 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 NPC2P61916 151 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
PTPN7-202ENST00000367279 C20orf203Q8NBC4 194 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 NAV2Q8IVL1 2488 aa9.1□□□□□ -0.95
PTPN7-202ENST00000367279 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 A4D1N5 150 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 TCL1BO95988 128 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 IGHV3OR16-12A0A075B7B8 117 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
PTPN7-202ENST00000367279 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
PTPN7-202ENST00000367279 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.95
PTPN7-202ENST00000367279 RHOHQ15669 191 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 VPREB3Q9UKI3 123 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 PRB1P04280 392 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 ZNF22P17026 224 aaPredicted RBP9.08□□□□□ -0.96
PTPN7-202ENST00000367279 GATA3P23771 443 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
PTPN7-202ENST00000367279 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 Q9UF83 564 aa9.08□□□□□ -0.96
PTPN7-202ENST00000367279 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 TRAV8-3A0A0A6YYJ7 113 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 RHODO00212 210 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 NSUN5P1Q3KNT7 163 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 ZNF462Q96JM2 2506 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 CUBNO60494 3623 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 FOXI1Q12951 378 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 C10orf126Q8N4M7 172 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 C11orf44Q8N8P7 122 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 LINC01587Q99440 93 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 PRRC2AP48634 2157 aaKnown RBP9.07□□□□□ -0.96
PTPN7-202ENST00000367279 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 LEPROTO15243 131 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 C1QTNF4Q9BXJ3 329 aa9.07□□□□□ -0.96
PTPN7-202ENST00000367279 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
PTPN7-202ENST00000367279 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-202ENST00000367279 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-202ENST00000367279 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
PTPN7-202ENST00000367279 A8MZ25 164 aa9.06□□□□□ -0.96
PTPN7-202ENST00000367279 DSCR9P59020 149 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms