RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 LENEPQ9Y5L5 61 aa7.86□□□□□ -1.15
SMC3-201ENST00000361804 POLR2KP53803 58 aaKnown RBP7.86□□□□□ -1.15
SMC3-201ENST00000361804 Q8N1Y9 231 aa7.86□□□□□ -1.15
SMC3-201ENST00000361804 DCANP1Q8TF63 244 aa7.86□□□□□ -1.15
SMC3-201ENST00000361804 NDUFS8O00217 210 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
SMC3-201ENST00000361804 IGHG2P01859 326 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 TCL1BO95988 128 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 KLLNB2CW77 178 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 CFC1P0CG37 223 aa7.85□□□□□ -1.15
SMC3-201ENST00000361804 KNCNA6PVL3 124 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 UBE2D1P51668 147 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 CRIP2P52943 208 aaPredicted RBP7.84□□□□□ -1.15
SMC3-201ENST00000361804 PMVKQ15126 192 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 CFAP126Q5VTH2 177 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 IGHV4-59P01825 116 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 NDUFA11Q86Y39 141 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 A6NDX4 124 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 A8MZ25 164 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 NAV2Q8IVL1 2488 aa7.84□□□□□ -1.15
SMC3-201ENST00000361804 ELANEP08246 267 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 NPC2P61916 151 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 TRPT1Q86TN4 253 aaKnown RBP7.83□□□□□ -1.16
SMC3-201ENST00000361804 AMELXQ99217 191 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 TRAV2A0A0B4J234 112 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 A0A0J9YXV3 536 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 SYNJ2BPP57105 145 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 FOXI1Q12951 378 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 DLX4Q92988 240 aaPredicted RBP7.83□□□□□ -1.16
SMC3-201ENST00000361804 CARD19Q96LW7 228 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 ATP5J2P56134 94 aa7.83□□□□□ -1.16
SMC3-201ENST00000361804 IGHV3-16A0A0C4DH30 117 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 MT-ATP8P03928 68 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 APRG1Q8IVJ8 170 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 PRRC2AP48634 2157 aaKnown RBP7.82□□□□□ -1.16
SMC3-201ENST00000361804 DEFB136Q30KP8 78 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 Q6ZSV7 163 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 CCL19Q99731 98 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
SMC3-201ENST00000361804 J3QQQ9 107 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 VCYO14598 125 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
SMC3-201ENST00000361804 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
SMC3-201ENST00000361804 C18orf65Q6ZTR6 163 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 USMG5Q96IX5 58 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 DUX3Q96PT4 197 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
SMC3-201ENST00000361804 A4D1N5 150 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 M0QY20 66 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 NXPH4O95158 308 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 CCDC168Q8NDH2 2452 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 IGHV4OR15-8A0A075B7B6 117 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 A0A087WW49 117 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 Q5PR19 223 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 C10orf105Q8TEF2 133 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 PIMREGQ9BSJ6 248 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 C1QTNF4Q9BXJ3 329 aa7.81□□□□□ -1.16
SMC3-201ENST00000361804 SPXQ9BT56 116 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 PRB1P04280 392 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 UBE2D3P61077 147 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 UBE2D2P62837 147 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
SMC3-201ENST00000361804 J3QR89 54 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 LGALS3P17931 250 aaKnown RBP7.8□□□□□ -1.16
SMC3-201ENST00000361804 XGP55808 180 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 HERVK_113P61574 105 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 DEFB112Q30KQ8 113 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 TMEM238LA0A1B0GVL6 79 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 A6NJY4 79 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 POM121L12Q8N7R1 296 aa7.8□□□□□ -1.16
SMC3-201ENST00000361804 TRBV27A0A0K0K1C4 114 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 LINC01619G3V211 115 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 SLC25A29Q8N8R3 303 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 A0A0J9YX75 114 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 IGHV3-38A0A0C4DH36 116 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 MSMBP08118 114 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 CFHR3Q02985 330 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
SMC3-201ENST00000361804 LGALS9O00182 355 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 ZNF22P17026 224 aaPredicted RBP7.78□□□□□ -1.16
SMC3-201ENST00000361804 ID1P41134 155 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 Q6ZSN1 163 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 TENM1Q9UKZ4 2725 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 PSMB8P28062 276 aa7.78□□□□□ -1.16
SMC3-201ENST00000361804 IGHV1OR15-1A0A075B7D0 117 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms