RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 IGLV3-9A0A075B6K5 115 aa7.23□□□□□ -1.25
VPS13A-203ENST00000360280 NDUFA7O95182 113 aa7.23□□□□□ -1.25
VPS13A-203ENST00000360280 PTPRSQ13332 1948 aa7.23□□□□□ -1.25
VPS13A-203ENST00000360280 COL4A5P29400 1685 aa7.22□□□□□ -1.25
VPS13A-203ENST00000360280 ARTNQ5T4W7 220 aa7.22□□□□□ -1.25
VPS13A-203ENST00000360280 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
VPS13A-203ENST00000360280 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
VPS13A-203ENST00000360280 GP9P14770 177 aa7.22□□□□□ -1.25
VPS13A-203ENST00000360280 GATA1P15976 413 aaPredicted RBP7.22□□□□□ -1.25
VPS13A-203ENST00000360280 IGHV3-30P01768 117 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 IGHV3-33P01772 117 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 IGLC6P0CF74 106 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 IGHV3-30-3P0DP02 117 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 IGHV3-30-5P0DP03 117 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 BLCAPP62952 87 aa7.21□□□□□ -1.25
VPS13A-203ENST00000360280 SERP1Q9Y6X1 66 aa7.21□□□□□ -1.26
VPS13A-203ENST00000360280 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
VPS13A-203ENST00000360280 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.26
VPS13A-203ENST00000360280 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
VPS13A-203ENST00000360280 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
VPS13A-203ENST00000360280 C17orf82Q86X59 251 aaPredicted RBP7.21□□□□□ -1.26
VPS13A-203ENST00000360280 SPG11Q96JI7 2443 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 LYPD6Q86Y78 171 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 WFDC10BQ8IUB3 73 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 C1orf147Q96MC9 270 aaPredicted RBP7.2□□□□□ -1.26
VPS13A-203ENST00000360280 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
VPS13A-203ENST00000360280 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 IGLV2-23P01705 113 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 CRIPAKQ8N1N5 446 aa7.2□□□□□ -1.26
VPS13A-203ENST00000360280 ENHOQ6UWT2 76 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 Q6ZR03 302 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 UNQ6494/PRO21346Q6UXR6 183 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 THSD7BQ9C0I4 1608 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 SERP2Q8N6R1 65 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 TIMM17BO60830 172 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 MAPK1IP1LQ8NDC0 245 aa7.19□□□□□ -1.26
VPS13A-203ENST00000360280 MRPS36P82909 103 aaKnown RBP7.19□□□□□ -1.26
VPS13A-203ENST00000360280 FHL1Q13642 323 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 LINC00173Q6ZV60 143 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 H7C423 109 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 IGFL3Q6UXB1 125 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 DEFB136Q30KP8 78 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 NPBQ8NG41 125 aa7.18□□□□□ -1.26
VPS13A-203ENST00000360280 KLK5Q9Y337 293 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-203ENST00000360280 CSPG4Q6UVK1 2322 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 SPATA12Q7Z6I5 190 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 DIAPH2-AS1Q14236 149 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 IGLV1-44P01699 117 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 SP5Q6BEB4 398 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-203ENST00000360280 IGLV11-55A0A075B6I3 123 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 GTSF1Q8WW33 167 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 PTH2Q96A98 100 aa7.17□□□□□ -1.26
VPS13A-203ENST00000360280 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 TRBV10-1A0A0K0K1A3 114 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 IGHV4-59P01825 116 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 SLURP1P55000 103 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 I3L2K1 104 aa7.16□□□□□ -1.26
VPS13A-203ENST00000360280 COL5A1P20908 1838 aaPredicted RBP7.15□□□□□ -1.26
VPS13A-203ENST00000360280 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 SPRY4Q9C004 299 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 Q8N9L7 120 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 P0DMU3 169 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 FAM231AP0DMU4 169 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 FAM231CP0DMU5 169 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.26
VPS13A-203ENST00000360280 A0A0J9YXY3 114 aa7.15□□□□□ -1.27
VPS13A-203ENST00000360280 NUPR1O60356 82 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 ZFAND2AQ8N6M9 145 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 CCKP06307 115 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 RNF138Q8WVD3 245 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 TRBV6-1A0A0K0K1D8 114 aa7.14□□□□□ -1.27
VPS13A-203ENST00000360280 C4orf3Q8WVX3 66 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 CTSGP08311 255 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 C9orf85Q96MD7 179 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 LRRC75A-AS1Q8N1F1 130 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 IL17DQ8TAD2 202 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 K7ENP7 123 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 WT1P19544 449 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-203ENST00000360280 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 MSRB1Q9NZV6 116 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 IGLV3-1P01715 115 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 PMAIP1Q13794 54 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 K7EIM0 57 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 TTTY13Q9BZ97 58 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 RETNQ9HD89 108 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 Q8NFD4 153 aa7.13□□□□□ -1.27
VPS13A-203ENST00000360280 DEFB112Q30KQ8 113 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 TMEM89A2RUT3 159 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 PRO0255Q9UI72 69 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 IGHV7-81A0A0B4J1V7 117 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 C2orf70A6NJV1 201 aa7.12□□□□□ -1.27
VPS13A-203ENST00000360280 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms