RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 RNASE8Q8TDE3 154 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-201ENST00000360228 CPAMD8Q8IZJ3 1885 aa13.58□□□□□ -0.24
CACNA1A-201ENST00000360228 SPRY2O43597 315 aa13.58□□□□□ -0.24
CACNA1A-201ENST00000360228 FLVCR1-AS1Q8TAF5 88 aa13.58□□□□□ -0.24
CACNA1A-201ENST00000360228 K7EN84 100 aa13.58□□□□□ -0.24
CACNA1A-201ENST00000360228 LRCOL1A6NCL2 159 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 TRBV7-3A0A075B6L6 115 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 IGLV3-9A0A075B6K5 115 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 PIFOQ8TCI5 191 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 HIST2H2BDQ6DRA6 164 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 CD59P13987 128 aa13.57□□□□□ -0.24
CACNA1A-201ENST00000360228 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 ZNF747Q9BV97 191 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 TIMM17BO60830 172 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 WT1-ASQ06250 92 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 WFDC10BQ8IUB3 73 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 ZNF726P1Q15940 193 aa13.56□□□□□ -0.24
CACNA1A-201ENST00000360228 A0A0J9YWU9 116 aa13.55□□□□□ -0.24
CACNA1A-201ENST00000360228 FGF23Q9GZV9 251 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-201ENST00000360228 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-201ENST00000360228 SLURP1P55000 103 aa13.55□□□□□ -0.24
CACNA1A-201ENST00000360228 K7EM74 188 aa13.54□□□□□ -0.24
CACNA1A-201ENST00000360228 NDUFA7O95182 113 aa13.54□□□□□ -0.24
CACNA1A-201ENST00000360228 LMO1P25800 156 aa13.54□□□□□ -0.24
CACNA1A-201ENST00000360228 GTSF1Q8WW33 167 aa13.54□□□□□ -0.24
CACNA1A-201ENST00000360228 IGKV1-6A0A0C4DH72 117 aa13.53□□□□□ -0.24
CACNA1A-201ENST00000360228 RNF138Q8WVD3 245 aa13.53□□□□□ -0.24
CACNA1A-201ENST00000360228 VPREB3Q9UKI3 123 aa13.53□□□□□ -0.24
CACNA1A-201ENST00000360228 PRR4Q16378 134 aa13.53□□□□□ -0.24
CACNA1A-201ENST00000360228 GP9P14770 177 aa13.53□□□□□ -0.24
CACNA1A-201ENST00000360228 KIR2DL5BQ8NHK3 375 aa13.52□□□□□ -0.25
CACNA1A-201ENST00000360228 LENEPQ9Y5L5 61 aa13.52□□□□□ -0.25
CACNA1A-201ENST00000360228 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-201ENST00000360228 CENPVL3A0A0U1RRI6 287 aa13.51□□□□□ -0.25
CACNA1A-201ENST00000360228 CTSGP08311 255 aa13.51□□□□□ -0.25
CACNA1A-201ENST00000360228 IMUPQ9GZP8 106 aa13.51□□□□□ -0.25
CACNA1A-201ENST00000360228 SDIM1Q6ZPB5 146 aa13.51□□□□□ -0.25
CACNA1A-201ENST00000360228 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
CACNA1A-201ENST00000360228 SPAG11BQ08648 103 aa13.5□□□□□ -0.25
CACNA1A-201ENST00000360228 GPHB5Q86YW7 130 aa13.5□□□□□ -0.25
CACNA1A-201ENST00000360228 COX7BP24311 80 aa13.49□□□□□ -0.25
CACNA1A-201ENST00000360228 Q8TCH9 128 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 KLK5Q9Y337 293 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 FXYD2P54710 66 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 MIR7-3HGQ8N6C7 128 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 DIAPH2-AS1Q14236 149 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 B3GALT5-AS1P59052 145 aa13.48□□□□□ -0.25
CACNA1A-201ENST00000360228 H3BUA1 57 aa13.47□□□□□ -0.25
CACNA1A-201ENST00000360228 TLN2Q9Y4G6 2542 aa13.47□□□□□ -0.25
CACNA1A-201ENST00000360228 TEX49A0A1B0GTD5 131 aa13.47□□□□□ -0.25
CACNA1A-201ENST00000360228 BLCAPP62952 87 aa13.47□□□□□ -0.25
CACNA1A-201ENST00000360228 ZNF491Q8N8L2 437 aa13.47□□□□□ -0.25
CACNA1A-201ENST00000360228 COL5A1P20908 1838 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 A0A0J9YXV3 536 aa13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 DEFB4AO15263 64 aa13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 CDPF1Q6NVV7 123 aa13.46□□□□□ -0.25
CACNA1A-201ENST00000360228 IGKV2-24A0A0C4DH68 120 aa13.46□□□□□ -0.26
CACNA1A-201ENST00000360228 VWCEQ96DN2 955 aa13.46□□□□□ -0.26
CACNA1A-201ENST00000360228 LOXP28300 417 aaPredicted RBP13.46□□□□□ -0.26
CACNA1A-201ENST00000360228 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
CACNA1A-201ENST00000360228 A0A096LNI7 61 aa13.45□□□□□ -0.26
CACNA1A-201ENST00000360228 Q8N1Y9 231 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 TOMM6Q96B49 74 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 MRPS36P82909 103 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 Q6ZS92 163 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 Q8NFD4 153 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 C16orf54Q6UWD8 224 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 SERTAD4-AS1Q5TG53 156 aa13.44□□□□□ -0.26
CACNA1A-201ENST00000360228 SERP2Q8N6R1 65 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 SLX1AQ9BQ83 275 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 COL4A1P02462 1669 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 SCXQ7RTU7 201 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 LINC00311Q8N616 119 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 DEFB135Q30KP9 77 aa13.43□□□□□ -0.26
CACNA1A-201ENST00000360228 DEFB112Q30KQ8 113 aa13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 HIGD2AQ9BW72 106 aa13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 TLN1Q9Y490 2541 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 TDRG1Q3Y452 100 aa13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 E9PLD3 99 aa13.42□□□□□ -0.26
CACNA1A-201ENST00000360228 IGHV4-30-2A0A087WSY4 118 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 MT-ATP8P03928 68 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 C15orf65H3BRN8 121 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 ENHOQ6UWT2 76 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 LOXL1Q08397 574 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 LINC00173Q6ZV60 143 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 Q8N9L7 120 aa13.41□□□□□ -0.26
CACNA1A-201ENST00000360228 IGHV4-30-4P0DP06 118 aa13.4□□□□□ -0.26
CACNA1A-201ENST00000360228 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
CACNA1A-201ENST00000360228 C14orf177Q52M58 125 aa13.4□□□□□ -0.26
CACNA1A-201ENST00000360228 LRRC75A-AS1Q8N1F1 130 aa13.4□□□□□ -0.26
CACNA1A-201ENST00000360228 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-201ENST00000360228 SMIM26A0A096LP01 95 aa13.39□□□□□ -0.27
CACNA1A-201ENST00000360228 TCL1BO95988 128 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms