RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CCKP06307 115 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 Q8N2B8 174 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 C11orf44Q8N8P7 122 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
PTPN22-201ENST00000359785 ZNRD1Q9P1U0 126 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 CUL9Q8IWT3 2517 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 LY6HO94772 140 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 PDE6GP18545 87 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 HIST2H2BCQ6DN03 193 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 HIST2H2BDQ6DRA6 164 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 CR1P17927 2039 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV4-28A0A0C4DH34 117 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 FAM236AA0A1B0GUQ0 79 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 FAM236BA0A1B0GV22 79 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV3-53P01767 116 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 ARHGAP32A7KAX9 2087 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 E7EQL1 145 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPANXN1Q5VSR9 72 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SCGB1D4Q6XE38 83 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 RNF182Q8N6D2 247 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 Q8TAT8 98 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 DEFB127Q9H1M4 99 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 MALRD1Q5VYJ5 2156 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 M0R1B8 84 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPRY3O43610 288 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 C6orf223Q8N319 242 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
PTPN22-201ENST00000359785 K7EQG2 157 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 PLA2G2AP14555 144 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 COX17Q14061 63 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 ENSAO43768 121 aaKnown RBP3.23□□□□□ -1.89
PTPN22-201ENST00000359785 C11orf72Q8NBR9 251 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 UNC80Q8N2C7 3258 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 A0A087WZ39 114 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 H3BVH4 76 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 H7BZZ5 65 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 CHCHD5Q9BSY4 110 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 MOB4Q9Y3A3 225 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 Q6ZRU5 148 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ1Q9NQZ3 744 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 BSPH1Q075Z2 132 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 NDUFA12Q9UI09 145 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 A6NDX4 124 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 GAGE2AQ6NT46 116 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 SOSTDC1Q6X4U4 206 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 NAV3Q8IVL0 2385 aa3.21□□□□□ -1.89
PTPN22-201ENST00000359785 C19orf84I3L1E1 186 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 C15orf32Q32M92 178 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ATP1A1-AS1Q5TC04 95 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 C22orf34Q6ZV56 151 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 FSHBP01225 129 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ID1P41134 155 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 CEMP1Q6PRD7 247 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-201ENST00000359785 BEX4Q9NWD9 120 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV1OR15-1A0A075B7D0 117 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ZNF56Q15929 161 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 DUX5Q96PT3 197 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 FXYD7P58549 80 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
PTPN22-201ENST00000359785 CABIN1Q9Y6J0 2220 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 TNCP24821 2201 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 GVQW2A0A096LPI5 108 aaPredicted RBP3.2□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV4-61A0A0C4DH41 118 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 K7EQD1 137 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 DLX1P56177 255 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 J3QLI3 93 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 ATP6V0E1O15342 81 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 Q1T7F1 81 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 FAM218AQ96MZ4 157 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 CYSTM1Q9H1C7 97 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 TRBV6-4A0A1B0GX49 114 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 H3BTX0 84 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 RPL39P62891 51 aaKnown RBP3.19□□□□□ -1.9
PTPN22-201ENST00000359785 TMEM86BQ8N661 226 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 ZCCHC13Q8WW36 166 aaKnown RBP3.19□□□□□ -1.9
PTPN22-201ENST00000359785 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 JPT2Q9H910 190 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 Q6ZQT0 140 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms