RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 URB1-AS1Q96HZ7 61 aa17.58■□□□□ 0.41
SHARPIN-201ENST00000359551 A0A0J9YWU9 116 aa17.58■□□□□ 0.4
SHARPIN-201ENST00000359551 DEFA6Q01524 100 aa17.58■□□□□ 0.4
SHARPIN-201ENST00000359551 HUWE1Q7Z6Z7 4374 aaKnown RBP17.58■□□□□ 0.4
SHARPIN-201ENST00000359551 SERF1AO75920 110 aa17.57■□□□□ 0.4
SHARPIN-201ENST00000359551 TRGV4A0A0C4DH28 118 aa17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 TRBV6-4A0A1B0GX49 114 aa17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 ESDP10768 282 aa17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 SNRPEP62304 92 aaKnown RBP17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 RPL32P62910 135 aaKnown RBP17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 NIT1Q86X76 327 aa17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 ST20Q9HBF5 79 aa17.56■□□□□ 0.4
SHARPIN-201ENST00000359551 IGLV2-18A0A075B6J9 118 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 LOC389332A0A1B0GUA5 103 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 K7EQD1 137 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 P0DMU3 169 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 FAM231AP0DMU4 169 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 FAM231CP0DMU5 169 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 IFI27P40305 119 aaPredicted RBP17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 SLC25A29Q8N8R3 303 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 DNAH9Q9NYC9 4486 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 TRBV10-1A0A0K0K1A3 114 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 NUPR1O60356 82 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 HOXA5P20719 270 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 POLR2KP53803 58 aaKnown RBP17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 C12orf74Q32Q52 190 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 PRSS3P2Q8NHM4 247 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 DNAJC30Q96LL9 226 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 SMIM2Q9BVW6 85 aa17.55■□□□□ 0.4
SHARPIN-201ENST00000359551 ATP5G1P05496 136 aa17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 LINC00614P0C842 121 aa17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 Q8N8P6 123 aa17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 NEXN-AS1Q8NBZ9 246 aa17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 NXT2Q9NPJ8 142 aaKnown RBP17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 Q9UF83 564 aa17.54■□□□□ 0.4
SHARPIN-201ENST00000359551 LINC01546A6NGU7 62 aa17.53■□□□□ 0.4
SHARPIN-201ENST00000359551 CHCHD1Q96BP2 118 aaKnown RBP17.53■□□□□ 0.4
SHARPIN-201ENST00000359551 TMEM70Q9BUB7 260 aa17.53■□□□□ 0.4
SHARPIN-201ENST00000359551 PMCHP20382 165 aa17.52■□□□□ 0.4
SHARPIN-201ENST00000359551 SDHAF1A6NFY7 115 aa17.52■□□□□ 0.39
SHARPIN-201ENST00000359551 RHOHQ15669 191 aa17.51■□□□□ 0.39
SHARPIN-201ENST00000359551 RNASEKQ6P5S7 137 aaKnown RBP17.51■□□□□ 0.39
SHARPIN-201ENST00000359551 FA2HQ7L5A8 372 aa17.51■□□□□ 0.39
SHARPIN-201ENST00000359551 HHLA3Q9XRX5 114 aa17.51■□□□□ 0.39
SHARPIN-201ENST00000359551 TRBV27A0A0K0K1C4 114 aa17.5■□□□□ 0.39
SHARPIN-201ENST00000359551 NHLRC4P0CG21 123 aaPredicted RBP17.5■□□□□ 0.39
SHARPIN-201ENST00000359551 HIST3H2BBQ8N257 126 aa17.5■□□□□ 0.39
SHARPIN-201ENST00000359551 AP5S1Q9NUS5 200 aa17.5■□□□□ 0.39
SHARPIN-201ENST00000359551 TNFRSF18Q9Y5U5 241 aa17.5■□□□□ 0.39
SHARPIN-201ENST00000359551 CRYBA4P53673 196 aa17.49■□□□□ 0.39
SHARPIN-201ENST00000359551 PRO0255Q9UI72 69 aa17.49■□□□□ 0.39
SHARPIN-201ENST00000359551 VCYO14598 125 aa17.48■□□□□ 0.39
SHARPIN-201ENST00000359551 C11orf45Q8TAV5 145 aa17.48■□□□□ 0.39
SHARPIN-201ENST00000359551 TRBV7-3A0A075B6L6 115 aa17.48■□□□□ 0.39
SHARPIN-201ENST00000359551 PRADC1Q9BSG0 188 aa17.48■□□□□ 0.39
SHARPIN-201ENST00000359551 K7EMI3 77 aa17.47■□□□□ 0.39
SHARPIN-201ENST00000359551 MEGF8Q7Z7M0 2845 aa17.46■□□□□ 0.39
SHARPIN-201ENST00000359551 HSBP1O75506 76 aa17.46■□□□□ 0.39
SHARPIN-201ENST00000359551 RPL36AP83881 106 aaKnown RBP17.46■□□□□ 0.39
SHARPIN-201ENST00000359551 RPL36ALQ969Q0 106 aaKnown RBP17.46■□□□□ 0.39
SHARPIN-201ENST00000359551 ZNRF2Q8NHG8 242 aa17.45■□□□□ 0.38
SHARPIN-201ENST00000359551 PDZD11Q5EBL8 140 aa17.45■□□□□ 0.38
SHARPIN-201ENST00000359551 Q6ZTC4 211 aa17.45■□□□□ 0.38
SHARPIN-201ENST00000359551 NEGR1Q7Z3B1 354 aa17.45■□□□□ 0.38
SHARPIN-201ENST00000359551 LINC00694P0DN24 101 aa17.44■□□□□ 0.38
SHARPIN-201ENST00000359551 UBE2D3P61077 147 aa17.44■□□□□ 0.38
SHARPIN-201ENST00000359551 UBE2D2P62837 147 aa17.44■□□□□ 0.38
SHARPIN-201ENST00000359551 LOC100131303A0A0U1RQF7 123 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 IFITM10A6NMD0 228 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 F5H768 121 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 I3L3M4 83 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 NANOS2P60321 138 aaKnown RBP17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 VSIG2Q96IQ7 327 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 KIR2DL4Q99706 377 aa17.43■□□□□ 0.38
SHARPIN-201ENST00000359551 TCAPO15273 167 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 COL7A1Q02388 2944 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 IGHV1-24A0A0C4DH33 117 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 GAGE12JA6NER3 117 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 PAX4O43316 350 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 GAGE1Q13065 139 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 GAGE4Q13068 117 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 GAGE5Q13069 117 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 LAGE3Q14657 143 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 GAGE13Q4V321 117 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 FAM19A2Q8N3H0 131 aa17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 PACRGQ96M98 296 aaPredicted RBP17.42■□□□□ 0.38
SHARPIN-201ENST00000359551 PRKDCP78527 4128 aaKnown RBP17.41■□□□□ 0.38
SHARPIN-201ENST00000359551 HTN3P15516 51 aa17.41■□□□□ 0.38
SHARPIN-201ENST00000359551 S100A2P29034 98 aa17.41■□□□□ 0.38
SHARPIN-201ENST00000359551 AMTP48728 403 aa17.41■□□□□ 0.38
SHARPIN-201ENST00000359551 A0A096LNJ9 63 aa17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 TSHBP01222 138 aa17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 ORMDL2Q53FV1 153 aa17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 DAZ4Q86SG3 579 aaKnown RBP17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 HIST1H2BLQ99880 126 aa17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 DAZ3Q9NR90 486 aaKnown RBP17.4■□□□□ 0.38
SHARPIN-201ENST00000359551 GYPEP15421 78 aa17.39■□□□□ 0.37
SHARPIN-201ENST00000359551 TMEM18Q96B42 140 aa17.39■□□□□ 0.37
SHARPIN-201ENST00000359551 TRAV26-1A0A087WT03 109 aa17.39■□□□□ 0.37
SHARPIN-201ENST00000359551 PMCHL1Q16048 86 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms