RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 C3orf79P0CE67 100 aa9.73□□□□□ -0.85
CCDC197-201ENST00000359253 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
CCDC197-201ENST00000359253 KRTDAPP60985 99 aa9.73□□□□□ -0.85
CCDC197-201ENST00000359253 DEFA6Q01524 100 aa9.73□□□□□ -0.85
CCDC197-201ENST00000359253 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
CCDC197-201ENST00000359253 TRAV4A0A0B4J268 109 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 C20orf202A1L168 122 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 PMCHL1Q16048 86 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
CCDC197-201ENST00000359253 KIR2DL4Q99706 377 aa9.72□□□□□ -0.85
CCDC197-201ENST00000359253 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 PRM2P04554 102 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 NOTCH1P46531 2555 aa9.71□□□□□ -0.86
CCDC197-201ENST00000359253 A0A096LNJ9 63 aa9.7□□□□□ -0.86
CCDC197-201ENST00000359253 PLAC8L1A1L4L8 177 aa9.7□□□□□ -0.86
CCDC197-201ENST00000359253 SYS1-DBNDD2H3BUS1 97 aa9.7□□□□□ -0.86
CCDC197-201ENST00000359253 ATP5LO75964 103 aa9.7□□□□□ -0.86
CCDC197-201ENST00000359253 C18orf15Q96N68 181 aa9.7□□□□□ -0.86
CCDC197-201ENST00000359253 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
CCDC197-201ENST00000359253 TRBV10-1A0A0K0K1A3 114 aa9.69□□□□□ -0.86
CCDC197-201ENST00000359253 SDHAF1A6NFY7 115 aa9.69□□□□□ -0.86
CCDC197-201ENST00000359253 NOP10Q9NPE3 64 aaKnown RBP9.69□□□□□ -0.86
CCDC197-201ENST00000359253 TNFRSF18Q9Y5U5 241 aa9.69□□□□□ -0.86
CCDC197-201ENST00000359253 I3L3M4 83 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 NUDT3O95989 172 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 IGHV4-30-4P0DP06 118 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 RHOHQ15669 191 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 TEX43Q6ZNM6 134 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 IFI27L1Q96BM0 104 aa9.68□□□□□ -0.86
CCDC197-201ENST00000359253 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
CCDC197-201ENST00000359253 MIFP14174 115 aa9.67□□□□□ -0.86
CCDC197-201ENST00000359253 Q6ZTI0 123 aa9.67□□□□□ -0.86
CCDC197-201ENST00000359253 Q8N976 141 aa9.67□□□□□ -0.86
CCDC197-201ENST00000359253 X6R8D5 127 aa9.67□□□□□ -0.86
CCDC197-201ENST00000359253 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
CCDC197-201ENST00000359253 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
CCDC197-201ENST00000359253 TOMM6Q96B49 74 aa9.66□□□□□ -0.86
CCDC197-201ENST00000359253 RNF183Q96D59 192 aa9.66□□□□□ -0.86
CCDC197-201ENST00000359253 TP53TG1Q9Y2A0 90 aa9.66□□□□□ -0.86
CCDC197-201ENST00000359253 PKIAP61925 76 aa9.65□□□□□ -0.86
CCDC197-201ENST00000359253 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
CCDC197-201ENST00000359253 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
CCDC197-201ENST00000359253 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
CCDC197-201ENST00000359253 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
CCDC197-201ENST00000359253 K7EIL1 84 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 LINC00173Q6ZV60 143 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 MRAPQ8TCY5 172 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 MEGF8Q7Z7M0 2845 aa9.64□□□□□ -0.87
CCDC197-201ENST00000359253 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 TEX48A0A1B0GUV7 120 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 GAGE12BA1L429 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 K7EQD1 137 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 GAGE7O76087 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 GAGE12FP0CL80 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 GAGE12GP0CL81 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 GAGE12IP0CL82 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
CCDC197-201ENST00000359253 DEFB121Q5J5C9 76 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 ERASQ7Z444 233 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
CCDC197-201ENST00000359253 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
CCDC197-201ENST00000359253 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
CCDC197-201ENST00000359253 NPSP0C0P6 89 aa9.62□□□□□ -0.87
CCDC197-201ENST00000359253 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
CCDC197-201ENST00000359253 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
CCDC197-201ENST00000359253 SCGB3A1Q96QR1 104 aa9.62□□□□□ -0.87
CCDC197-201ENST00000359253 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
CCDC197-201ENST00000359253 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
CCDC197-201ENST00000359253 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
CCDC197-201ENST00000359253 PRSS1P07477 247 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 Q6ZN92 141 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 Q6ZSN1 163 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
CCDC197-201ENST00000359253 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
CCDC197-201ENST00000359253 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
CCDC197-201ENST00000359253 TSHBP01222 138 aa9.6□□□□□ -0.87
CCDC197-201ENST00000359253 PAPPA-AS1Q5QFB9 102 aa9.6□□□□□ -0.87
CCDC197-201ENST00000359253 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
CCDC197-201ENST00000359253 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 CRYBA4P53673 196 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 COTL1Q14019 142 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 TMEM97Q5BJF2 176 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms