RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
PCDH1-202ENST00000357517 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
PCDH1-202ENST00000357517 PAPPA-AS1Q5QFB9 102 aa7.88□□□□□ -1.15
PCDH1-202ENST00000357517 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
PCDH1-202ENST00000357517 Q9HAA7 133 aa7.88□□□□□ -1.15
PCDH1-202ENST00000357517 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 SYNJ2BPP57105 145 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 DPH3P1Q9H4G8 78 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 LST1O00453 97 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 NDUFB3O43676 98 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 C9orf106Q8NAJ2 232 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 NBASA2RRP1 2371 aa7.87□□□□□ -1.15
PCDH1-202ENST00000357517 RAI1Q7Z5J4 1906 aaPredicted RBP7.87□□□□□ -1.15
PCDH1-202ENST00000357517 ATOX1O00244 68 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 PRR9Q5T870 116 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 FAM223AQ8IWN6 122 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 PATE3B3GLJ2 98 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 TMEM105Q8N8V8 129 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
PCDH1-202ENST00000357517 SIRPDQ9H106 197 aa7.86□□□□□ -1.15
PCDH1-202ENST00000357517 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 TIRAPP58753 221 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 TIMM21Q9BVV7 248 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 RNASE4P34096 147 aaKnown RBP7.85□□□□□ -1.15
PCDH1-202ENST00000357517 WFDC9Q8NEX5 89 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 SDHAF1A6NFY7 115 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
PCDH1-202ENST00000357517 LEPROTO15243 131 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 IGHG3P01860 377 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 LINC00311Q8N616 119 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 TTC28Q96AY4 2481 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 ATP5G1P05496 136 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
PCDH1-202ENST00000357517 SPTAN1Q13813 2472 aaKnown RBP7.83□□□□□ -1.16
PCDH1-202ENST00000357517 SAP25Q8TEE9 199 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 BUB1B-PAK6H3BSN5 160 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 IGHV1-8P0DP01 117 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 ACYP1P07311 99 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
PCDH1-202ENST00000357517 F6UB75 175 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
PCDH1-202ENST00000357517 LPAL2Q16609 132 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 LRBAP50851 2863 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 DNAL4O96015 105 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 FHL2Q14192 279 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 ZNF576Q9H609 170 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
PCDH1-202ENST00000357517 CLPSL1A2RUU4 121 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 NUP37Q8NFH4 326 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 C9orf85Q96MD7 179 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 HILS1P60008 231 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 LYNX1G3V0Z9 82 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 LYNX1P0DP58 116 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 C9orf47Q6ZRZ4 202 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 C22orf34Q6ZV56 151 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 GPHB5Q86YW7 130 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 MDS2Q8NDY4 140 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 TMEM243Q9BU79 118 aa7.81□□□□□ -1.16
PCDH1-202ENST00000357517 USP17L23D6RBM5 183 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 CDSNQ15517 529 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 PIEZO2Q9H5I5 2752 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 CTSGP08311 255 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 ECSCRQ19T08 205 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 COX8CQ7Z4L0 72 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 PRB1P04280 392 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 NBL1P41271 181 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 DCANP1Q8TF63 244 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 LINC00574Q9H8X3 128 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 RETNQ9HD89 108 aa7.8□□□□□ -1.16
PCDH1-202ENST00000357517 FAM223BA6NKX1 122 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 VCYO14598 125 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 CD59P13987 128 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 TMEM61Q8N0U2 210 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 Q8N2B8 174 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 F8W735 103 aaPredicted RBP7.79□□□□□ -1.16
PCDH1-202ENST00000357517 IGLV1-44P01699 117 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 CLEC19AQ6UXS0 136 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 SLC25A15Q9Y619 301 aa7.79□□□□□ -1.16
PCDH1-202ENST00000357517 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 VMO1Q7Z5L0 202 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 HTN1P15515 57 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 KLK9Q9UKQ9 250 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 MUC4Q99102 2169 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
PCDH1-202ENST00000357517 CD28P10747 220 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms