RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TPPP3Q9BW30 176 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 HERC1Q15751 4861 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 TMSB15BA0A087X1C1 80 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 LINC01546A6NGU7 62 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 PRSS47A8MTI9 375 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 H3BVH4 76 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 RNASE3P12724 160 aaKnown RBP5□□□□□ -1.61
VPS13A-201ENST00000355766 AKR1D1P51857 326 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
VPS13A-201ENST00000355766 SPINK13Q1W4C9 94 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 OR10AG1Q8NH19 301 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 HIST1H2BLQ99880 126 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 SPXQ9BT56 116 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 DPH3P1Q9H4G8 78 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 NAGKQ9UJ70 344 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 DNAH2Q9P225 4427 aa5□□□□□ -1.61
VPS13A-201ENST00000355766 TRAV12-3A0A0B4J271 114 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KIR2DL5BA0A0G2JN68 375 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KIR2DL5BA0A0G2JPC4 375 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 GRIFINA4D1Z8 144 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 LINC01549A6NIU2 74 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KNCNA6PVL3 124 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 M0R2Z0 102 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 SERF1AO75920 110 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 CD7P09564 240 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 DEFB1P60022 68 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 ZNF415Q09FC8 603 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KIR2DL5AQ8N109 375 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KIR2DL5BQ8NHK3 375 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 C20orf78Q9BR46 151 aa4.99□□□□□ -1.61
VPS13A-201ENST00000355766 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
VPS13A-201ENST00000355766 KLK5Q9Y337 293 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-201ENST00000355766 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 IFITM10A6NMD0 228 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 A8MWV9 139 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 D6R8Y8 96 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 RHODO00212 210 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 TCAPO15273 167 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 CIDEAO60543 219 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 NPSP0C0P6 89 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 CKS2P33552 79 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 MRPL51Q4U2R6 128 aaKnown RBP4.98□□□□□ -1.61
VPS13A-201ENST00000355766 LINC00336Q6ZUF6 198 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 AMN1Q8IY45 258 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 TMEM263Q8WUH6 116 aaKnown RBP4.98□□□□□ -1.61
VPS13A-201ENST00000355766 RNF185Q96GF1 192 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 SAMD10Q9BYL1 202 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 GOLT1BQ9Y3E0 138 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 AGRNO00468 2067 aa4.98□□□□□ -1.61
VPS13A-201ENST00000355766 TRAV12-2A0A075B6T6 113 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 CBY3A6NI87 242 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 H7C1H1 209 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 M0R2P5 195 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 HSBP1O75506 76 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 LINC00614P0C842 121 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 SMIM17P0DL12 118 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 FABP4P15090 132 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 MUC21Q5SSG8 566 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 ZNF705AQ6ZN79 300 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-201ENST00000355766 Q6ZWC4 215 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 OVOL2Q9BRP0 275 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 WFDC10AQ9H1F0 79 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 MAP1LC3AQ9H492 121 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 KIF25-AS1Q9Y6Z4 181 aa4.97□□□□□ -1.61
VPS13A-201ENST00000355766 HSPG2P98160 4391 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 A0A0J9YWU9 116 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 TRBV6-5A0A0K0K1A5 114 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 SMIM9A6NGZ8 99 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 J3KRW8 73 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 IGKV3-20P01619 116 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 RBMY1A1P0DJD3 496 aaKnown RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 RBMY1CP0DJD4 496 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 EVI2AP22794 236 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 G0S2P27469 103 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 AMTP48728 403 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 DAZ2Q13117 558 aaKnown RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 JOSD1Q15040 202 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 RBMY1FQ15415 496 aaKnown RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 IQCJQ1A5X6 159 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 KIAA1644Q3SXP7 199 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 ZFP2Q6ZN57 461 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 FA2HQ7L5A8 372 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 LINC00518Q8N0U6 118 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 RNASE8Q8TDE3 154 aaKnown RBP4.96□□□□□ -1.62
VPS13A-201ENST00000355766 RASL10AQ92737 203 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 C16orf74Q96GX8 76 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 HSPB8Q9UJY1 196 aa4.96□□□□□ -1.62
VPS13A-201ENST00000355766 GNRH2O43555 120 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 TNFRSF6BO95407 300 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 APOC4P55056 127 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 LINC00315P59091 139 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 RNASEKQ6P5S7 137 aaKnown RBP4.95□□□□□ -1.62
VPS13A-201ENST00000355766 Q6ZQT7 251 aa4.95□□□□□ -1.62
VPS13A-201ENST00000355766 NIT1Q86X76 327 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms