RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 NPSP0C0P6 89 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 EMP1P54849 157 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 RPL39LQ96EH5 51 aaKnown RBP9.77□□□□□ -0.85
HOXA1-202ENST00000355633 ANK2Q01484 3957 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 PMCHP20382 165 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 RNF183Q96D59 192 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
HOXA1-202ENST00000355633 AMTP48728 403 aa9.76□□□□□ -0.85
HOXA1-202ENST00000355633 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
HOXA1-202ENST00000355633 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
HOXA1-202ENST00000355633 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 GAGE7O76087 117 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 FAM19A2Q8N3H0 131 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
HOXA1-202ENST00000355633 PKD1L1Q8TDX9 2849 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 TRAV4A0A0B4J268 109 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 M0QY20 66 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 MIFP14174 115 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
HOXA1-202ENST00000355633 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
HOXA1-202ENST00000355633 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
HOXA1-202ENST00000355633 H7C1H1 209 aa9.74□□□□□ -0.85
HOXA1-202ENST00000355633 RBX1P62877 108 aa9.74□□□□□ -0.85
HOXA1-202ENST00000355633 KPRPQ5T749 579 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-202ENST00000355633 Q8N8P6 123 aa9.74□□□□□ -0.85
HOXA1-202ENST00000355633 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 PRB2P02812 416 aaPredicted RBP9.73□□□□□ -0.85
HOXA1-202ENST00000355633 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 EDA2RQ9HAV5 297 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 IGHV1-24A0A0C4DH33 117 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 IGHV3-53P01767 116 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 PMCHL1Q16048 86 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 ST20Q9HBF5 79 aa9.73□□□□□ -0.85
HOXA1-202ENST00000355633 TRBV6-5A0A0K0K1A5 114 aa9.72□□□□□ -0.85
HOXA1-202ENST00000355633 Q8NAQ8 132 aa9.72□□□□□ -0.85
HOXA1-202ENST00000355633 TP53TG1Q9Y2A0 90 aa9.72□□□□□ -0.85
HOXA1-202ENST00000355633 Q6ZSN1 163 aa9.72□□□□□ -0.85
HOXA1-202ENST00000355633 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
HOXA1-202ENST00000355633 LYRM9A8MSI8 78 aa9.71□□□□□ -0.86
HOXA1-202ENST00000355633 DEFB4AO15263 64 aa9.71□□□□□ -0.86
HOXA1-202ENST00000355633 LINC00612Q8N6U2 182 aa9.71□□□□□ -0.86
HOXA1-202ENST00000355633 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.86
HOXA1-202ENST00000355633 K7EIL1 84 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 P0DMU3 169 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
HOXA1-202ENST00000355633 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 POLR2KP53803 58 aaKnown RBP9.7□□□□□ -0.86
HOXA1-202ENST00000355633 RETNQ9HD89 108 aa9.7□□□□□ -0.86
HOXA1-202ENST00000355633 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
HOXA1-202ENST00000355633 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
HOXA1-202ENST00000355633 VCYO14598 125 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 LAGE3Q14657 143 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 DEFB121Q5J5C9 76 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 TNFRSF18Q9Y5U5 241 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 A0A096LNJ9 63 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 K7EMI3 77 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 K7EP13 123 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 LEPROTL1O95214 131 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 HBDP02042 147 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
HOXA1-202ENST00000355633 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 K7EQD1 137 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 KRTAP21-3Q3LHN1 58 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 DNAH3Q8TD57 4116 aa9.67□□□□□ -0.86
HOXA1-202ENST00000355633 FCER1GP30273 86 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 SLC25A29Q8N8R3 303 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 Q9UF83 564 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 SPART-AS1P0CW21 52 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
HOXA1-202ENST00000355633 NUDT3O95989 172 aa9.65□□□□□ -0.86
HOXA1-202ENST00000355633 KRTDAPP60985 99 aa9.65□□□□□ -0.86
HOXA1-202ENST00000355633 DAD1P61803 113 aa9.65□□□□□ -0.86
HOXA1-202ENST00000355633 FHL2Q14192 279 aa9.65□□□□□ -0.86
HOXA1-202ENST00000355633 HSPB8Q9UJY1 196 aa9.65□□□□□ -0.86
HOXA1-202ENST00000355633 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.87
HOXA1-202ENST00000355633 C20orf202A1L168 122 aa9.65□□□□□ -0.87
HOXA1-202ENST00000355633 I3L3M4 83 aa9.65□□□□□ -0.87
HOXA1-202ENST00000355633 COL5A1-AS1Q5SY13 56 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms