RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 AGRNO00468 2067 aa9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 PRM2P04554 102 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 C4orf3Q8WVX3 66 aa9.35□□□□□ -0.91
PCDHB11-201ENST00000354757 VWC2LB2RUY7 222 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 TACC2O95359 2948 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 PSMB8P28062 276 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 LAMA5O15230 3695 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 A0A0J9YX75 114 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 A8MWV9 139 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 MALP21145 153 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 LENEPQ9Y5L5 61 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 C9orf47Q6ZRZ4 202 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 ANAPC13Q9BS18 74 aa9.34□□□□□ -0.91
PCDHB11-201ENST00000354757 GAGE6Q13070 117 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 G3V4G9 280 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 RHODO00212 210 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 WFDC2Q14508 124 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 Q6ZQT7 251 aa9.33□□□□□ -0.92
PCDHB11-201ENST00000354757 Q8N8P6 123 aa9.32□□□□□ -0.92
PCDHB11-201ENST00000354757 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
PCDHB11-201ENST00000354757 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
PCDHB11-201ENST00000354757 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
PCDHB11-201ENST00000354757 SETXQ7Z333 2677 aaKnown RBP9.32□□□□□ -0.92
PCDHB11-201ENST00000354757 M0R2P5 195 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 FXYD2P54710 66 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 TRAV8-2A0A0B4J237 113 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 CRPP02741 224 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 LGALS9BQ3B8N2 356 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 CRIP1P50238 77 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 IGKV2-29A2NJV5 120 aaPredicted RBP9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 C9orf66Q5T8R8 295 aa9.31□□□□□ -0.92
PCDHB11-201ENST00000354757 TMEM86BQ8N661 226 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 K7EQG2 157 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 CRLF1O75462 422 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 APOC4P55056 127 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 I3L3M4 83 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 SNCGO76070 127 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 MYCNOSP40205 109 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
PCDHB11-201ENST00000354757 HLA-DRB4P13762 266 aa9.29□□□□□ -0.92
PCDHB11-201ENST00000354757 HLA-DRB4X5D2U9 266 aa9.29□□□□□ -0.92
PCDHB11-201ENST00000354757 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
PCDHB11-201ENST00000354757 MRGPRG-AS1Q2M3A8 158 aa9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 MBD6Q96DN6 1003 aa9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 PSMG3-AS1Q96PY0 264 aa9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 KALRNO60229 2985 aa9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 F8W735 103 aaPredicted RBP9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
PCDHB11-201ENST00000354757 COX6CP09669 75 aa9.27□□□□□ -0.92
PCDHB11-201ENST00000354757 P0DMU3 169 aa9.27□□□□□ -0.92
PCDHB11-201ENST00000354757 FAM231AP0DMU4 169 aa9.27□□□□□ -0.92
PCDHB11-201ENST00000354757 FAM231CP0DMU5 169 aa9.27□□□□□ -0.92
PCDHB11-201ENST00000354757 LINC00158P58513 81 aa9.27□□□□□ -0.92
PCDHB11-201ENST00000354757 PAX4O43316 350 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 A0A1B0GXF2 115 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 TRBV25-1A0A075B6N4 114 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 F8W1H4 67 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 UBE2DNLQ8IWF7 75 aa9.27□□□□□ -0.93
PCDHB11-201ENST00000354757 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 H3BMM0 161 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 PLNP26678 52 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 BOD1L2Q8IYS8 172 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 HILS1P60008 231 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 PRR9Q5T870 116 aa9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.26□□□□□ -0.93
PCDHB11-201ENST00000354757 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 LINC01549A6NIU2 74 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 ZFAND2AQ8N6M9 145 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 PRIMA1Q86XR5 153 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 CEND1Q8N111 149 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
PCDHB11-201ENST00000354757 C12orf74Q32Q52 190 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms