RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 C15orf53Q8NAA6 179 aa16.88■□□□□ 0.29
HMGA2-201ENST00000354636 NEXN-AS1Q8NBZ9 246 aa16.88■□□□□ 0.29
HMGA2-201ENST00000354636 A0A096LPF7 62 aa16.87■□□□□ 0.29
HMGA2-201ENST00000354636 NIT2Q9NQR4 276 aa16.87■□□□□ 0.29
HMGA2-201ENST00000354636 SMKR1H3BMG3 65 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 ICOSQ9Y6W8 199 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 TRBV7-3A0A075B6L6 115 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 NCR2O95944 276 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 CKS2P33552 79 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 RPL36AP83881 106 aaKnown RBP16.86■□□□□ 0.29
HMGA2-201ENST00000354636 MRPL23Q16540 153 aaKnown RBP16.86■□□□□ 0.29
HMGA2-201ENST00000354636 ZNRF2Q8NHG8 242 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 RPL36ALQ969Q0 106 aaKnown RBP16.86■□□□□ 0.29
HMGA2-201ENST00000354636 RPL39LQ96EH5 51 aaKnown RBP16.86■□□□□ 0.29
HMGA2-201ENST00000354636 DNAJC30Q96LL9 226 aa16.86■□□□□ 0.29
HMGA2-201ENST00000354636 GAGE12JA6NER3 117 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 D6R8Y8 96 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 APCSP02743 223 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 PPBPP02775 128 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 LINC00694P0DN24 101 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 RPS10P46783 165 aaKnown RBP16.85■□□□□ 0.29
HMGA2-201ENST00000354636 TCTAP57738 103 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 GAGE1Q13065 139 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 GAGE4Q13068 117 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 GAGE5Q13069 117 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 GAGE13Q4V321 117 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
HMGA2-201ENST00000354636 PLECQ15149 4684 aaKnown RBP16.84■□□□□ 0.29
HMGA2-201ENST00000354636 MRPL18Q9H0U6 180 aaKnown RBP16.84■□□□□ 0.29
HMGA2-201ENST00000354636 ORMDL3Q8N138 153 aa16.83■□□□□ 0.28
HMGA2-201ENST00000354636 NRACQ8N912 160 aa16.83■□□□□ 0.28
HMGA2-201ENST00000354636 TRAPPC1Q9Y5R8 145 aa16.83■□□□□ 0.28
HMGA2-201ENST00000354636 SRIP30626 198 aa16.82■□□□□ 0.28
HMGA2-201ENST00000354636 TNFRSF18Q9Y5U5 241 aa16.82■□□□□ 0.28
HMGA2-201ENST00000354636 TRBV6-5A0A0K0K1A5 114 aa16.81■□□□□ 0.28
HMGA2-201ENST00000354636 UBE2D3P61077 147 aa16.81■□□□□ 0.28
HMGA2-201ENST00000354636 UBE2D2P62837 147 aa16.81■□□□□ 0.28
HMGA2-201ENST00000354636 KIAA1644Q3SXP7 199 aa16.81■□□□□ 0.28
HMGA2-201ENST00000354636 OR10J3Q5JRS4 329 aa16.81■□□□□ 0.28
HMGA2-201ENST00000354636 PPP1R17O96001 155 aa16.8■□□□□ 0.28
HMGA2-201ENST00000354636 FABP9Q0Z7S8 132 aa16.8■□□□□ 0.28
HMGA2-201ENST00000354636 NEGR1Q7Z3B1 354 aa16.8■□□□□ 0.28
HMGA2-201ENST00000354636 RAB5AP20339 215 aa16.8■□□□□ 0.28
HMGA2-201ENST00000354636 SH2D6Q7Z4S9 175 aa16.8■□□□□ 0.28
HMGA2-201ENST00000354636 TNFRSF6BO95407 300 aa16.79■□□□□ 0.28
HMGA2-201ENST00000354636 ATP6V0E2Q8NHE4 81 aa16.79■□□□□ 0.28
HMGA2-201ENST00000354636 PRELID3AQ96N28 172 aa16.79■□□□□ 0.28
HMGA2-201ENST00000354636 NPYP01303 97 aa16.78■□□□□ 0.28
HMGA2-201ENST00000354636 PHOX2AO14813 284 aa16.77■□□□□ 0.28
HMGA2-201ENST00000354636 ST20Q9HBF5 79 aa16.77■□□□□ 0.28
HMGA2-201ENST00000354636 LAMTOR2Q9Y2Q5 125 aa16.77■□□□□ 0.28
HMGA2-201ENST00000354636 SDHAF1A6NFY7 115 aa16.76■□□□□ 0.27
HMGA2-201ENST00000354636 TENM2Q9NT68 2774 aa16.76■□□□□ 0.27
HMGA2-201ENST00000354636 POLR2KP53803 58 aaKnown RBP16.75■□□□□ 0.27
HMGA2-201ENST00000354636 SUMO2P61956 95 aaKnown RBP16.75■□□□□ 0.27
HMGA2-201ENST00000354636 DAZ4Q86SG3 579 aaKnown RBP16.75■□□□□ 0.27
HMGA2-201ENST00000354636 C20orf78Q9BR46 151 aa16.75■□□□□ 0.27
HMGA2-201ENST00000354636 TMEM70Q9BUB7 260 aa16.75■□□□□ 0.27
HMGA2-201ENST00000354636 DAZ3Q9NR90 486 aaKnown RBP16.75■□□□□ 0.27
HMGA2-201ENST00000354636 ALKBH7Q9BT30 221 aaPredicted RBP16.75■□□□□ 0.27
HMGA2-201ENST00000354636 IGHV3-38A0A0C4DH36 116 aa16.74■□□□□ 0.27
HMGA2-201ENST00000354636 ESRGQ1W209 222 aa16.74■□□□□ 0.27
HMGA2-201ENST00000354636 LYPD5Q6UWN5 251 aa16.74■□□□□ 0.27
HMGA2-201ENST00000354636 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-201ENST00000354636 GTSF1LQ9H1H1 148 aa16.74■□□□□ 0.27
HMGA2-201ENST00000354636 TRGC2P03986 189 aa16.73■□□□□ 0.27
HMGA2-201ENST00000354636 TRBV27A0A0K0K1C4 114 aa16.72■□□□□ 0.27
HMGA2-201ENST00000354636 PRSS47A8MTI9 375 aa16.71■□□□□ 0.27
HMGA2-201ENST00000354636 CCL18P55774 89 aa16.71■□□□□ 0.27
HMGA2-201ENST00000354636 TIRAPP58753 221 aa16.71■□□□□ 0.27
HMGA2-201ENST00000354636 RPL32P62910 135 aaKnown RBP16.71■□□□□ 0.27
HMGA2-201ENST00000354636 LYSTQ99698 3801 aa16.7■□□□□ 0.26
HMGA2-201ENST00000354636 VCYO14598 125 aa16.7■□□□□ 0.26
HMGA2-201ENST00000354636 UBE2DNLQ8IWF7 75 aa16.7■□□□□ 0.26
HMGA2-201ENST00000354636 I3L3M4 83 aa16.69■□□□□ 0.26
HMGA2-201ENST00000354636 PMCHP20382 165 aa16.69■□□□□ 0.26
HMGA2-201ENST00000354636 NTM-AS1Q6ZSK4 140 aa16.69■□□□□ 0.26
HMGA2-201ENST00000354636 SMIM2Q9BVW6 85 aa16.69■□□□□ 0.26
HMGA2-201ENST00000354636 MAP1LC3AQ9H492 121 aa16.69■□□□□ 0.26
HMGA2-201ENST00000354636 LINC00588Q9Y4M8 146 aa16.68■□□□□ 0.26
HMGA2-201ENST00000354636 TMEM97Q5BJF2 176 aa16.67■□□□□ 0.26
HMGA2-201ENST00000354636 DEFB104AQ8WTQ1 72 aa16.67■□□□□ 0.26
HMGA2-201ENST00000354636 IGLV2-18A0A075B6J9 118 aa16.66■□□□□ 0.26
HMGA2-201ENST00000354636 TRBV6-8A0A0A6YYG3 113 aa16.66■□□□□ 0.26
HMGA2-201ENST00000354636 LOC389332A0A1B0GUA5 103 aa16.66■□□□□ 0.26
HMGA2-201ENST00000354636 COTL1Q14019 142 aa16.66■□□□□ 0.26
HMGA2-201ENST00000354636 LELP1Q5T871 98 aa16.66■□□□□ 0.26
HMGA2-201ENST00000354636 TSHBP01222 138 aa16.64■□□□□ 0.25
HMGA2-201ENST00000354636 C18orf32Q8TCD1 76 aa16.64■□□□□ 0.25
HMGA2-201ENST00000354636 KIR2DL4Q99706 377 aa16.64■□□□□ 0.25
HMGA2-201ENST00000354636 MRPS16Q9Y3D3 137 aaKnown RBP16.64■□□□□ 0.25
HMGA2-201ENST00000354636 Q8N8P6 123 aa16.63■□□□□ 0.25
HMGA2-201ENST00000354636 LY6G6CO95867 125 aa16.62■□□□□ 0.25
HMGA2-201ENST00000354636 IFI27P40305 119 aaPredicted RBP16.62■□□□□ 0.25
HMGA2-201ENST00000354636 IQCJQ1A5X6 159 aa16.62■□□□□ 0.25
HMGA2-201ENST00000354636 LGALS9CQ6DKI2 356 aa16.62■□□□□ 0.25
HMGA2-201ENST00000354636 UPK3BQ9BT76 320 aa16.62■□□□□ 0.25
HMGA2-201ENST00000354636 NXT2Q9NPJ8 142 aaKnown RBP16.62■□□□□ 0.25
HMGA2-201ENST00000354636 VPS13DQ5THJ4 4388 aa16.61■□□□□ 0.25
HMGA2-201ENST00000354636 TRBV25-1A0A075B6N4 114 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms