RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 Q96M85 177 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 GAFA1Q96PS6 74 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 BET1LQ9NYM9 111 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 SMG1Q96Q15 3661 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 IGLV3-16A0A075B6K0 115 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TRDCB7Z8K6 153 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TYMSP04818 313 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 IL12AP29459 219 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 FXYD4P59646 89 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 RPS11P62280 158 aaKnown RBP eCLIP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TWIST1Q15672 202 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 CGB2Q6NT52 195 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 ORAOV1Q8WV07 137 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 RBKSQ9H477 322 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 C19orf12Q9NSK7 152 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 DSCAML1Q8TD84 2053 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 C3orf85A0A1B0GTC6 90 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 SAP18O00422 153 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 PHOX2AO14813 284 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 ZNF861PO60384 105 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 BCE1O60756 84 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 ATP6V1G2O95670 118 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 HSPE1P61604 102 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 BVES-AS1Q5T3Y7 98 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 Q6AWC8 147 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TXNL4BQ9NX01 149 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 PRO0628Q9UI54 55 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TRIP12Q14669 1992 aaPredicted RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 SCO2A0A1W2PP80 73 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 RPL29P47914 159 aaKnown RBP1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 UBE2V2Q15819 145 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 COMMD6Q7Z4G1 85 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 TMEM229BQ8NBD8 167 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 R4GMQ9 66 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 KMT2AQ03164 3969 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 ZGRF1Q86YA3 2104 aa1.35□□□□□ -2.19
SMARCAD1-201ENST00000354268 CR1P17927 2039 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 IGKV1D-17A0A075B6S4 117 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 A0A1B0GV90 55 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 KNCNA6PVL3 124 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 LINC00158P58513 81 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 MYOZ3Q8TDC0 251 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 FAM60AQ9NP50 221 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 ANKRD36A6QL64 1941 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 DOCK4Q8N1I0 1966 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 MT-ND4LP03901 98 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 MRPL52Q86TS9 123 aaKnown RBP1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 NIT1Q86X76 327 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 VKORC1L1Q8N0U8 176 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 SFT2D1Q8WV19 159 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 FAM3DQ96BQ1 224 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
SMARCAD1-201ENST00000354268 IGKV1D-37A0A075B6S9 117 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 LINC01546A6NGU7 62 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 SFT2D2O95562 160 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 MRPL3P09001 348 aaKnown RBP1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 GAGE6Q13070 117 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 CAMK2N1Q7Z7J9 78 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 LINC00612Q8N6U2 182 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 MRPL35Q9NZE8 188 aaKnown RBP1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 GNG8Q9UK08 70 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 DIDO1Q9BTC0 2240 aaKnown RBP1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 TNRC6BQ9UPQ9 1833 aaKnown RBP1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 EFCAB10A6NFE3 127 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 FAM25AB3EWG3 89 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 FAM25CB3EWG5 89 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 FAM25GB3EWG6 89 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 I3L521 148 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 KRTAP10-11P60412 298 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 MARVELD1Q9BSK0 173 aa1.34□□□□□ -2.2
SMARCAD1-201ENST00000354268 IGHV3-72A0A0B4J1Y9 119 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 LOC285095A0A1B0GVY8 99 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 M0R378 163 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 C9orf129Q5T035 196 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 FAM74A4Q5TZK3 123 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 Q6ZQT7 251 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.33□□□□□ -2.21e-7■■■■■ 29.4
SMARCAD1-201ENST00000354268 SPTBN2O15020 2390 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 A0A1B0GWA3 101 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 hADV29S1A0JD25 119 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 CPSF4LA6NMK7 179 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 MEF2BQ02080 365 aaPredicted RBP1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 RFESDQ8TAC1 157 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 ZNF625Q96I27 306 aaPredicted RBP1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 DERL1Q9BUN8 251 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 KCNE3Q9Y6H6 103 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 A0A1W2PRE2 83 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 FABP5P3A8MUU1 101 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 NDUFC1O43677 76 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 SERF1AO75920 110 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 SCXQ7RTU7 201 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 PPDPFLQ8WWR9 84 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 NRTNQ99748 197 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 V9GYY9 64 aa1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 INTS1Q8N201 2190 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-201ENST00000354268 FN1P02751 2386 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms